Protein–RNA interactions for Protein: P00441

SOD1, Superoxide dismutase [Cu-Zn], humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOD1P00441 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SOD1P00441 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
SOD1P00441 AC008406.3-201ENST00000620001 1374 ntBASIC22.62■■□□□ 1.21
SOD1P00441 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SOD1P00441 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SOD1P00441 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SOD1P00441 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SOD1P00441 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SOD1P00441 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.61■■□□□ 1.21
SOD1P00441 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC22.61■■□□□ 1.21
SOD1P00441 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
SOD1P00441 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.61■■□□□ 1.21
SOD1P00441 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SOD1P00441 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
SOD1P00441 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SOD1P00441 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SOD1P00441 AC141586.4-201ENST00000624558 1573 ntBASIC22.6■■□□□ 1.21
SOD1P00441 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SOD1P00441 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC22.6■■□□□ 1.21
SOD1P00441 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SOD1P00441 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
SOD1P00441 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SOD1P00441 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SOD1P00441 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.59■■□□□ 1.21
SOD1P00441 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SOD1P00441 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC22.59■■□□□ 1.21
SOD1P00441 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SOD1P00441 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SOD1P00441 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SOD1P00441 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SOD1P00441 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC22.58■■□□□ 1.21
SOD1P00441 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
SOD1P00441 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.58■■□□□ 1.21
SOD1P00441 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.21
SOD1P00441 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.58■■□□□ 1.2
SOD1P00441 AC004812.2-201ENST00000611079 2094 ntBASIC22.58■■□□□ 1.2
SOD1P00441 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SOD1P00441 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SOD1P00441 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SOD1P00441 EI24-213ENST00000618552 1747 ntTSL 5 BASIC22.57■■□□□ 1.2
SOD1P00441 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC22.57■■□□□ 1.2
SOD1P00441 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SOD1P00441 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SOD1P00441 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC22.57■■□□□ 1.2
SOD1P00441 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.57■■□□□ 1.2
SOD1P00441 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
SOD1P00441 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
SOD1P00441 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC22.56■■□□□ 1.2
SOD1P00441 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.56■■□□□ 1.2
SOD1P00441 AL136116.3-201ENST00000402907 1138 ntBASIC22.56■■□□□ 1.2
SOD1P00441 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SOD1P00441 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
SOD1P00441 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SOD1P00441 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SOD1P00441 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SOD1P00441 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC22.56■■□□□ 1.2
SOD1P00441 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SOD1P00441 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.55■■□□□ 1.2
SOD1P00441 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SOD1P00441 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SOD1P00441 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SOD1P00441 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SOD1P00441 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SOD1P00441 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOD1P00441 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.54■■□□□ 1.2
SOD1P00441 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOD1P00441 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SOD1P00441 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.54■■□□□ 1.2
SOD1P00441 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC22.54■■□□□ 1.2
SOD1P00441 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SOD1P00441 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SOD1P00441 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SOD1P00441 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
SOD1P00441 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOD1P00441 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SOD1P00441 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SOD1P00441 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC22.53■■□□□ 1.2
SOD1P00441 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
SOD1P00441 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC22.53■■□□□ 1.2
SOD1P00441 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOD1P00441 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SOD1P00441 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SOD1P00441 AC009102.2-201ENST00000606772 1639 ntBASIC22.53■■□□□ 1.2
SOD1P00441 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SOD1P00441 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC22.52■■□□□ 1.2
SOD1P00441 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
SOD1P00441 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC22.52■■□□□ 1.2
SOD1P00441 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SOD1P00441 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
SOD1P00441 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC22.52■■□□□ 1.2
SOD1P00441 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC22.52■■□□□ 1.2
SOD1P00441 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
SOD1P00441 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
SOD1P00441 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SOD1P00441 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SOD1P00441 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
SOD1P00441 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SOD1P00441 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SOD1P00441 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SOD1P00441 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms