Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CDRT1O95170 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
CDRT1O95170 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 SMPD5-203ENST00000639008 1464 ntBASIC20.26■□□□□ 0.83
CDRT1O95170 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CDRT1O95170 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
CDRT1O95170 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 MIR3960-201ENST00000583311 91 ntBASIC20.26■□□□□ 0.83
CDRT1O95170 MIR7108-201ENST00000614319 87 ntBASIC20.26■□□□□ 0.83
CDRT1O95170 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 FMR1-AS1-201ENST00000594922 2005 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CDRT1O95170 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CDRT1O95170 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDRT1O95170 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDRT1O95170 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDRT1O95170 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDRT1O95170 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CDRT1O95170 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.25■□□□□ 0.83
CDRT1O95170 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.25■□□□□ 0.83
CDRT1O95170 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CDRT1O95170 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CDRT1O95170 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDRT1O95170 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDRT1O95170 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDRT1O95170 AC092068.2-201ENST00000590491 1708 ntBASIC20.24■□□□□ 0.83
CDRT1O95170 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CDRT1O95170 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CDRT1O95170 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT1O95170 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT1O95170 TPT1-202ENST00000379055 948 ntTSL 2 BASIC20.23■□□□□ 0.83
CDRT1O95170 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CDRT1O95170 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT1O95170 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT1O95170 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CDRT1O95170 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.23■□□□□ 0.83
CDRT1O95170 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT1O95170 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDRT1O95170 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT1O95170 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT1O95170 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.22■□□□□ 0.83
CDRT1O95170 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDRT1O95170 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.22■□□□□ 0.83
CDRT1O95170 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC20.22■□□□□ 0.83
CDRT1O95170 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT1O95170 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT1O95170 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.21■□□□□ 0.83
CDRT1O95170 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT1O95170 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT1O95170 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.21■□□□□ 0.83
CDRT1O95170 PVT1-219ENST00000523427 938 ntTSL 3 BASIC20.21■□□□□ 0.83
CDRT1O95170 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.21■□□□□ 0.83
CDRT1O95170 AC092296.2-201ENST00000589470 999 ntBASIC20.21■□□□□ 0.83
CDRT1O95170 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT1O95170 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.21■□□□□ 0.83
CDRT1O95170 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT1O95170 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT1O95170 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT1O95170 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDRT1O95170 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CDRT1O95170 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDRT1O95170 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC20.2■□□□□ 0.82
CDRT1O95170 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.2■□□□□ 0.82
CDRT1O95170 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC20.2■□□□□ 0.82
CDRT1O95170 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.2■□□□□ 0.82
CDRT1O95170 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDRT1O95170 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CDRT1O95170 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDRT1O95170 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDRT1O95170 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 163.4 ms