Protein–RNA interactions for Protein: O95168

NDUFB4, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 4, humanhuman

Predictions only

Length 129 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4O95168 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC17.79■□□□□ 0.44
NDUFB4O95168 GUSBP5-202ENST00000510805 1989 ntBASIC17.79■□□□□ 0.44
NDUFB4O95168 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.79■□□□□ 0.44
NDUFB4O95168 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NDUFB4O95168 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
NDUFB4O95168 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
NDUFB4O95168 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFB4O95168 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NDUFB4O95168 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFB4O95168 REST-210ENST00000638187 1334 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFB4O95168 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFB4O95168 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC17.78■□□□□ 0.44
NDUFB4O95168 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFB4O95168 RP9P-202ENST00000450133 1212 ntBASIC17.78■□□□□ 0.44
NDUFB4O95168 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFB4O95168 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.78■□□□□ 0.44
NDUFB4O95168 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFB4O95168 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFB4O95168 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NDUFB4O95168 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFB4O95168 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFB4O95168 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFB4O95168 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFB4O95168 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFB4O95168 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFB4O95168 AC007375.3-201ENST00000600936 2314 ntBASIC17.77■□□□□ 0.44
NDUFB4O95168 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NDUFB4O95168 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFB4O95168 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFB4O95168 ECEL1P2-201ENST00000461596 1295 ntBASIC17.77■□□□□ 0.44
NDUFB4O95168 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NDUFB4O95168 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NDUFB4O95168 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
NDUFB4O95168 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
NDUFB4O95168 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.76■□□□□ 0.43
NDUFB4O95168 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFB4O95168 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
NDUFB4O95168 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NDUFB4O95168 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
NDUFB4O95168 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC17.76■□□□□ 0.43
NDUFB4O95168 AC093536.1-201ENST00000569153 554 ntBASIC17.76■□□□□ 0.43
NDUFB4O95168 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC17.76■□□□□ 0.43
NDUFB4O95168 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFB4O95168 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
NDUFB4O95168 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.76■□□□□ 0.43
NDUFB4O95168 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFB4O95168 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFB4O95168 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFB4O95168 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFB4O95168 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NDUFB4O95168 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFB4O95168 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.75■□□□□ 0.43
NDUFB4O95168 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFB4O95168 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFB4O95168 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFB4O95168 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC17.75■□□□□ 0.43
NDUFB4O95168 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFB4O95168 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFB4O95168 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
NDUFB4O95168 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFB4O95168 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.75■□□□□ 0.43
NDUFB4O95168 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.75■□□□□ 0.43
NDUFB4O95168 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFB4O95168 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NDUFB4O95168 ANOS2P-203ENST00000472227 1816 ntBASIC17.75■□□□□ 0.43
NDUFB4O95168 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC17.74■□□□□ 0.43
NDUFB4O95168 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDUFB4O95168 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NDUFB4O95168 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDUFB4O95168 LSR-203ENST00000360798 1963 ntTSL 2 BASIC17.74■□□□□ 0.43
NDUFB4O95168 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC17.74■□□□□ 0.43
NDUFB4O95168 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NDUFB4O95168 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.74■□□□□ 0.43
NDUFB4O95168 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NDUFB4O95168 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFB4O95168 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFB4O95168 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NDUFB4O95168 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC17.73■□□□□ 0.43
NDUFB4O95168 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NDUFB4O95168 TPT1-202ENST00000379055 948 ntTSL 2 BASIC17.73■□□□□ 0.43
NDUFB4O95168 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NDUFB4O95168 FOXO3B-201ENST00000395675 1928 ntBASIC17.72■□□□□ 0.43
NDUFB4O95168 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
NDUFB4O95168 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFB4O95168 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
NDUFB4O95168 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms