Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 MIR6724-1-201ENST00000616420 92 ntBASIC21.9■■□□□ 1.1
CNOT3O75175 MIR6724-2-201ENST00000616483 92 ntBASIC21.9■■□□□ 1.1
CNOT3O75175 MIR6724-4-201ENST00000617390 92 ntBASIC21.9■■□□□ 1.1
CNOT3O75175 MIR6724-3-201ENST00000622482 92 ntBASIC21.9■■□□□ 1.1
CNOT3O75175 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
CNOT3O75175 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.9■■□□□ 1.1
CNOT3O75175 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
CNOT3O75175 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
CNOT3O75175 AC131281.2-201ENST00000520478 145 ntBASIC21.89■■□□□ 1.09
CNOT3O75175 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.89■■□□□ 1.09
CNOT3O75175 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.89■■□□□ 1.09
CNOT3O75175 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.89■■□□□ 1.09
CNOT3O75175 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.89■■□□□ 1.09
CNOT3O75175 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
CNOT3O75175 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC21.88■■□□□ 1.09
CNOT3O75175 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNOT3O75175 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.88■■□□□ 1.09
CNOT3O75175 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNOT3O75175 PEMT-206ENST00000435340 960 ntTSL 5 BASIC21.88■■□□□ 1.09
CNOT3O75175 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC21.88■■□□□ 1.09
CNOT3O75175 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNOT3O75175 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
CNOT3O75175 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
CNOT3O75175 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNOT3O75175 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNOT3O75175 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
CNOT3O75175 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNOT3O75175 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
CNOT3O75175 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CNOT3O75175 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
CNOT3O75175 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.87■■□□□ 1.09
CNOT3O75175 LBH-205ENST00000407930 756 ntTSL 2 BASIC21.87■■□□□ 1.09
CNOT3O75175 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.87■■□□□ 1.09
CNOT3O75175 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.87■■□□□ 1.09
CNOT3O75175 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.87■■□□□ 1.09
CNOT3O75175 MIR3621-201ENST00000580529 85 ntBASIC21.87■■□□□ 1.09
CNOT3O75175 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
CNOT3O75175 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC21.87■■□□□ 1.09
CNOT3O75175 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT3O75175 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.86■■□□□ 1.09
CNOT3O75175 CD72-202ENST00000378430 585 ntTSL 3 BASIC21.86■■□□□ 1.09
CNOT3O75175 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT3O75175 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT3O75175 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.86■■□□□ 1.09
CNOT3O75175 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
CNOT3O75175 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC21.86■■□□□ 1.09
CNOT3O75175 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC21.86■■□□□ 1.09
CNOT3O75175 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.86■■□□□ 1.09
CNOT3O75175 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT3O75175 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
CNOT3O75175 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
CNOT3O75175 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNOT3O75175 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
CNOT3O75175 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC21.85■■□□□ 1.09
CNOT3O75175 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC21.85■■□□□ 1.09
CNOT3O75175 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
CNOT3O75175 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT3O75175 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT3O75175 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT3O75175 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.84■■□□□ 1.09
CNOT3O75175 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
CNOT3O75175 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT3O75175 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT3O75175 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
CNOT3O75175 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT3O75175 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT3O75175 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.84■■□□□ 1.09
CNOT3O75175 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC21.84■■□□□ 1.09
CNOT3O75175 AC068473.5-201ENST00000616428 2072 ntBASIC21.84■■□□□ 1.09
CNOT3O75175 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT3O75175 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.84■■□□□ 1.09
CNOT3O75175 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.84■■□□□ 1.09
CNOT3O75175 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
CNOT3O75175 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
CNOT3O75175 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC21.83■■□□□ 1.09
CNOT3O75175 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNOT3O75175 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.83■■□□□ 1.09
CNOT3O75175 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
CNOT3O75175 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNOT3O75175 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC21.83■■□□□ 1.09
CNOT3O75175 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNOT3O75175 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNOT3O75175 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC21.83■■□□□ 1.09
CNOT3O75175 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC21.83■■□□□ 1.09
CNOT3O75175 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
CNOT3O75175 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
CNOT3O75175 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CNOT3O75175 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
CNOT3O75175 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
CNOT3O75175 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNOT3O75175 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CNOT3O75175 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
CNOT3O75175 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNOT3O75175 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CNOT3O75175 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.82■■□□□ 1.08
CNOT3O75175 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC21.81■■□□□ 1.08
CNOT3O75175 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT3O75175 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT3O75175 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CNOT3O75175 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms