Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.53■□□□□ 0.56
SSSCA1O60232 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SSSCA1O60232 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SSSCA1O60232 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSSCA1O60232 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SSSCA1O60232 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SSSCA1O60232 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSSCA1O60232 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
SSSCA1O60232 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSSCA1O60232 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
SSSCA1O60232 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC18.52■□□□□ 0.56
SSSCA1O60232 ZNRF2P2-203ENST00000454624 420 ntBASIC18.52■□□□□ 0.56
SSSCA1O60232 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.52■□□□□ 0.56
SSSCA1O60232 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSSCA1O60232 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSSCA1O60232 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SSSCA1O60232 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSSCA1O60232 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSSCA1O60232 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SSSCA1O60232 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSSCA1O60232 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC18.51■□□□□ 0.55
SSSCA1O60232 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.51■□□□□ 0.55
SSSCA1O60232 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSSCA1O60232 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSSCA1O60232 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSSCA1O60232 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC18.51■□□□□ 0.55
SSSCA1O60232 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC18.51■□□□□ 0.55
SSSCA1O60232 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC18.51■□□□□ 0.55
SSSCA1O60232 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSSCA1O60232 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSSCA1O60232 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSSCA1O60232 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SSSCA1O60232 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSSCA1O60232 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.5■□□□□ 0.55
SSSCA1O60232 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSSCA1O60232 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSSCA1O60232 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSSCA1O60232 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSSCA1O60232 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSSCA1O60232 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSSCA1O60232 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSSCA1O60232 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SSSCA1O60232 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SSSCA1O60232 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.5■□□□□ 0.55
SSSCA1O60232 AC127496.7-201ENST00000625110 1798 ntBASIC18.5■□□□□ 0.55
SSSCA1O60232 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 AC060814.1-201ENST00000554326 538 ntBASIC18.49■□□□□ 0.55
SSSCA1O60232 METRNL-202ENST00000570778 967 ntTSL 5 BASIC18.49■□□□□ 0.55
SSSCA1O60232 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.49■□□□□ 0.55
SSSCA1O60232 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SSSCA1O60232 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.49■□□□□ 0.55
SSSCA1O60232 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC18.49■□□□□ 0.55
SSSCA1O60232 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SSSCA1O60232 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.49■□□□□ 0.55
SSSCA1O60232 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSSCA1O60232 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSSCA1O60232 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SSSCA1O60232 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSSCA1O60232 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSSCA1O60232 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSSCA1O60232 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.48■□□□□ 0.55
SSSCA1O60232 RPS2P35-201ENST00000443417 897 ntBASIC18.48■□□□□ 0.55
SSSCA1O60232 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSSCA1O60232 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SSSCA1O60232 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SSSCA1O60232 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.48■□□□□ 0.55
SSSCA1O60232 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.48■□□□□ 0.55
SSSCA1O60232 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSSCA1O60232 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSSCA1O60232 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SSSCA1O60232 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSSCA1O60232 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSSCA1O60232 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSSCA1O60232 ECEL1P1-201ENST00000373592 1742 ntBASIC18.47■□□□□ 0.55
SSSCA1O60232 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSSCA1O60232 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSSCA1O60232 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SSSCA1O60232 RP9P-202ENST00000450133 1212 ntBASIC18.47■□□□□ 0.55
SSSCA1O60232 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC18.47■□□□□ 0.55
SSSCA1O60232 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSSCA1O60232 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SSSCA1O60232 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SSSCA1O60232 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SSSCA1O60232 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
SSSCA1O60232 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
SSSCA1O60232 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSSCA1O60232 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSSCA1O60232 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSSCA1O60232 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.46■□□□□ 0.55
SSSCA1O60232 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
SSSCA1O60232 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 16.7 ms