Protein–RNA interactions for Protein: O00194

RAB27B, Ras-related protein Rab-27B, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB27BO00194 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB27BO00194 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB27BO00194 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB27BO00194 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.44■□□□□ 0.7
RAB27BO00194 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB27BO00194 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB27BO00194 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB27BO00194 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB27BO00194 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB27BO00194 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
RAB27BO00194 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB27BO00194 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB27BO00194 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB27BO00194 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB27BO00194 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB27BO00194 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB27BO00194 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB27BO00194 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB27BO00194 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB27BO00194 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB27BO00194 HES4-204ENST00000484667 667 ntTSL 3 BASIC19.42■□□□□ 0.7
RAB27BO00194 RPS2-202ENST00000526522 924 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB27BO00194 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB27BO00194 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RAB27BO00194 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB27BO00194 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB27BO00194 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB27BO00194 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB27BO00194 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB27BO00194 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB27BO00194 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB27BO00194 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB27BO00194 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB27BO00194 HES4-202ENST00000428771 1040 ntTSL 2 BASIC19.41■□□□□ 0.7
RAB27BO00194 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RAB27BO00194 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB27BO00194 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB27BO00194 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB27BO00194 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.4■□□□□ 0.7
RAB27BO00194 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB27BO00194 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.4■□□□□ 0.7
RAB27BO00194 MIR7108-201ENST00000614319 87 ntBASIC19.4■□□□□ 0.7
RAB27BO00194 H19-210ENST00000439725 1929 ntTSL 2 BASIC19.4■□□□□ 0.7
RAB27BO00194 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RAB27BO00194 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB27BO00194 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RAB27BO00194 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
RAB27BO00194 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RAB27BO00194 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
RAB27BO00194 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB27BO00194 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RAB27BO00194 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
RAB27BO00194 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RAB27BO00194 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB27BO00194 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB27BO00194 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB27BO00194 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RAB27BO00194 RPS2P7-201ENST00000447334 885 ntBASIC19.39■□□□□ 0.69
RAB27BO00194 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB27BO00194 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RAB27BO00194 AC009831.1-201ENST00000580420 1582 ntBASIC19.39■□□□□ 0.69
RAB27BO00194 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RAB27BO00194 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RAB27BO00194 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC19.39■□□□□ 0.69
RAB27BO00194 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB27BO00194 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB27BO00194 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RAB27BO00194 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RAB27BO00194 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB27BO00194 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB27BO00194 GUSBP5-202ENST00000510805 1989 ntBASIC19.38■□□□□ 0.69
RAB27BO00194 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.38■□□□□ 0.69
RAB27BO00194 LINC00526-201ENST00000581067 1875 ntBASIC19.38■□□□□ 0.69
RAB27BO00194 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.37■□□□□ 0.69
RAB27BO00194 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RAB27BO00194 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB27BO00194 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB27BO00194 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC19.36■□□□□ 0.69
RAB27BO00194 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
RAB27BO00194 PVT1-219ENST00000523427 938 ntTSL 3 BASIC19.36■□□□□ 0.69
RAB27BO00194 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB27BO00194 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB27BO00194 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB27BO00194 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RAB27BO00194 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms