Protein–RNA interactions for Protein: E7ERA6

RNF223, RING finger protein 223, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF223E7ERA6 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF223E7ERA6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF223E7ERA6 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF223E7ERA6 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF223E7ERA6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF223E7ERA6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.97■□□□□ 0.63
RNF223E7ERA6 AC126544.1-201ENST00000580842 1059 ntBASIC18.97■□□□□ 0.63
RNF223E7ERA6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF223E7ERA6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
RNF223E7ERA6 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
RNF223E7ERA6 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF223E7ERA6 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF223E7ERA6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF223E7ERA6 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF223E7ERA6 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF223E7ERA6 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF223E7ERA6 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
RNF223E7ERA6 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF223E7ERA6 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF223E7ERA6 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF223E7ERA6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF223E7ERA6 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF223E7ERA6 AC022517.1-201ENST00000592429 346 ntBASIC18.96■□□□□ 0.63
RNF223E7ERA6 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF223E7ERA6 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF223E7ERA6 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RNF223E7ERA6 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RNF223E7ERA6 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC18.95■□□□□ 0.62
RNF223E7ERA6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF223E7ERA6 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF223E7ERA6 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF223E7ERA6 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF223E7ERA6 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF223E7ERA6 AL137784.2-201ENST00000607332 1000 ntBASIC18.95■□□□□ 0.62
RNF223E7ERA6 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.95■□□□□ 0.62
RNF223E7ERA6 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF223E7ERA6 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF223E7ERA6 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RNF223E7ERA6 AC092803.2-201ENST00000564287 1899 ntBASIC18.94■□□□□ 0.62
RNF223E7ERA6 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF223E7ERA6 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF223E7ERA6 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF223E7ERA6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF223E7ERA6 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF223E7ERA6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF223E7ERA6 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 SLC6A10P-202ENST00000431994 2058 ntBASIC18.94■□□□□ 0.62
RNF223E7ERA6 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF223E7ERA6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF223E7ERA6 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF223E7ERA6 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF223E7ERA6 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 KRT18P5-201ENST00000436075 1291 ntBASIC18.93■□□□□ 0.62
RNF223E7ERA6 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF223E7ERA6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.93■□□□□ 0.62
RNF223E7ERA6 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RNF223E7ERA6 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF223E7ERA6 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF223E7ERA6 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF223E7ERA6 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF223E7ERA6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF223E7ERA6 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF223E7ERA6 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF223E7ERA6 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF223E7ERA6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF223E7ERA6 YBX1P1-201ENST00000445822 960 ntBASIC18.92■□□□□ 0.62
RNF223E7ERA6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF223E7ERA6 pRNA.6-201ENST00000610482 90 ntBASIC18.92■□□□□ 0.62
RNF223E7ERA6 pRNA.5-201ENST00000612139 90 ntBASIC18.92■□□□□ 0.62
RNF223E7ERA6 pRNA.11-201ENST00000618423 90 ntBASIC18.92■□□□□ 0.62
RNF223E7ERA6 pRNA.13-201ENST00000619112 90 ntBASIC18.92■□□□□ 0.62
RNF223E7ERA6 AL031602.1-201ENST00000633169 911 ntBASIC18.92■□□□□ 0.62
RNF223E7ERA6 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF223E7ERA6 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF223E7ERA6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF223E7ERA6 TSPY26P-201ENST00000476365 1326 ntBASIC18.92■□□□□ 0.62
RNF223E7ERA6 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms