Protein–RNA interactions for Protein: B7ZW38

HNRNPCL3, Heterogeneous nuclear ribonucleoprotein C-like 3, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL3B7ZW38 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HNRNPCL3B7ZW38 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HNRNPCL3B7ZW38 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HNRNPCL3B7ZW38 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HNRNPCL3B7ZW38 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.13■□□□□ 0.97
HNRNPCL3B7ZW38 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HNRNPCL3B7ZW38 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
HNRNPCL3B7ZW38 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HNRNPCL3B7ZW38 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HNRNPCL3B7ZW38 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.13■□□□□ 0.97
HNRNPCL3B7ZW38 AC092068.2-201ENST00000590491 1708 ntBASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 AC010980.1-201ENST00000587192 1142 ntBASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HNRNPCL3B7ZW38 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HNRNPCL3B7ZW38 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 MIR4281-201ENST00000580852 62 ntBASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 AF131216.4-201ENST00000638924 1588 ntBASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
HNRNPCL3B7ZW38 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 AC012354.3-201ENST00000623734 483 ntBASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
HNRNPCL3B7ZW38 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.08■□□□□ 0.97
HNRNPCL3B7ZW38 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC21.08■□□□□ 0.97
HNRNPCL3B7ZW38 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HNRNPCL3B7ZW38 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
HNRNPCL3B7ZW38 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
HNRNPCL3B7ZW38 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC21.08■□□□□ 0.97
HNRNPCL3B7ZW38 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
HNRNPCL3B7ZW38 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 MIR4508-201ENST00000584178 70 ntBASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
HNRNPCL3B7ZW38 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC21.06■□□□□ 0.96
HNRNPCL3B7ZW38 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
HNRNPCL3B7ZW38 DUSP8P3-201ENST00000399571 1760 ntBASIC21.05■□□□□ 0.96
HNRNPCL3B7ZW38 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms