Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSGN1A6NI15 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MSGN1A6NI15 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
MSGN1A6NI15 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSGN1A6NI15 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
MSGN1A6NI15 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSGN1A6NI15 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
MSGN1A6NI15 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSGN1A6NI15 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.84■□□□□ 0.61
MSGN1A6NI15 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
MSGN1A6NI15 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
MSGN1A6NI15 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
MSGN1A6NI15 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
MSGN1A6NI15 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MSGN1A6NI15 AC127496.7-201ENST00000625110 1798 ntBASIC18.83■□□□□ 0.61
MSGN1A6NI15 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
MSGN1A6NI15 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
MSGN1A6NI15 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
MSGN1A6NI15 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
MSGN1A6NI15 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
MSGN1A6NI15 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSGN1A6NI15 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MSGN1A6NI15 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSGN1A6NI15 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSGN1A6NI15 KRT18P10-201ENST00000388836 1287 ntBASIC18.83■□□□□ 0.6
MSGN1A6NI15 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
MSGN1A6NI15 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC18.83■□□□□ 0.6
MSGN1A6NI15 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
MSGN1A6NI15 BRD4-212ENST00000630599 726 ntTSL 2 BASIC18.83■□□□□ 0.6
MSGN1A6NI15 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
MSGN1A6NI15 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
MSGN1A6NI15 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
MSGN1A6NI15 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSGN1A6NI15 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
MSGN1A6NI15 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.83■□□□□ 0.6
MSGN1A6NI15 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSGN1A6NI15 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.82■□□□□ 0.6
MSGN1A6NI15 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSGN1A6NI15 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSGN1A6NI15 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSGN1A6NI15 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MSGN1A6NI15 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC18.82■□□□□ 0.6
MSGN1A6NI15 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
MSGN1A6NI15 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSGN1A6NI15 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
MSGN1A6NI15 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.82■□□□□ 0.6
MSGN1A6NI15 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
MSGN1A6NI15 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
MSGN1A6NI15 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MSGN1A6NI15 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MSGN1A6NI15 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
MSGN1A6NI15 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MSGN1A6NI15 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.81■□□□□ 0.6
MSGN1A6NI15 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
MSGN1A6NI15 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC18.81■□□□□ 0.6
MSGN1A6NI15 AL592293.1-201ENST00000502889 1188 ntBASIC18.81■□□□□ 0.6
MSGN1A6NI15 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
MSGN1A6NI15 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
MSGN1A6NI15 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
MSGN1A6NI15 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.81■□□□□ 0.6
MSGN1A6NI15 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSGN1A6NI15 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSGN1A6NI15 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSGN1A6NI15 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSGN1A6NI15 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
MSGN1A6NI15 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSGN1A6NI15 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC18.8■□□□□ 0.6
MSGN1A6NI15 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
MSGN1A6NI15 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
MSGN1A6NI15 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSGN1A6NI15 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSGN1A6NI15 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSGN1A6NI15 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSGN1A6NI15 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
MSGN1A6NI15 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSGN1A6NI15 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MSGN1A6NI15 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MSGN1A6NI15 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSGN1A6NI15 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSGN1A6NI15 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
MSGN1A6NI15 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSGN1A6NI15 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
MSGN1A6NI15 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSGN1A6NI15 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.79■□□□□ 0.6
MSGN1A6NI15 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC18.79■□□□□ 0.6
MSGN1A6NI15 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
MSGN1A6NI15 ANOS2P-203ENST00000472227 1816 ntBASIC18.79■□□□□ 0.6
MSGN1A6NI15 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
MSGN1A6NI15 ECEL1P1-201ENST00000373592 1742 ntBASIC18.78■□□□□ 0.6
MSGN1A6NI15 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSGN1A6NI15 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSGN1A6NI15 AC018755.3-202ENST00000596210 929 ntBASIC18.78■□□□□ 0.6
MSGN1A6NI15 U85056.1-201ENST00000616429 682 ntBASIC18.78■□□□□ 0.6
MSGN1A6NI15 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
MSGN1A6NI15 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
MSGN1A6NI15 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.78■□□□□ 0.6
MSGN1A6NI15 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.77■□□□□ 0.6
MSGN1A6NI15 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSGN1A6NI15 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
MSGN1A6NI15 AL137060.1-201ENST00000618151 2648 ntBASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms