Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 CREM-229ENST00000474362 1030 ntTSL 2 BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LRIT2A6NDA9 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
LRIT2A6NDA9 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
LRIT2A6NDA9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRIT2A6NDA9 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
LRIT2A6NDA9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
LRIT2A6NDA9 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRIT2A6NDA9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRIT2A6NDA9 TSPY9P-201ENST00000440215 945 ntBASIC21.7■■□□□ 1.06
LRIT2A6NDA9 TSPY11P-201ENST00000442607 1045 ntBASIC21.7■■□□□ 1.06
LRIT2A6NDA9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC21.7■■□□□ 1.06
LRIT2A6NDA9 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.7■■□□□ 1.06
LRIT2A6NDA9 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
LRIT2A6NDA9 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.69■■□□□ 1.06
LRIT2A6NDA9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
LRIT2A6NDA9 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
LRIT2A6NDA9 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRIT2A6NDA9 GUSBP5-201ENST00000418136 578 ntBASIC21.69■■□□□ 1.06
LRIT2A6NDA9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRIT2A6NDA9 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRIT2A6NDA9 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
LRIT2A6NDA9 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT2A6NDA9 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
LRIT2A6NDA9 UNC93B8-201ENST00000511903 705 ntBASIC21.68■■□□□ 1.06
LRIT2A6NDA9 MTDHP2-201ENST00000601468 714 ntBASIC21.68■■□□□ 1.06
LRIT2A6NDA9 AC010997.5-201ENST00000609182 354 ntBASIC21.68■■□□□ 1.06
LRIT2A6NDA9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT2A6NDA9 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT2A6NDA9 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT2A6NDA9 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
LRIT2A6NDA9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.68■■□□□ 1.06
LRIT2A6NDA9 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.68■■□□□ 1.06
LRIT2A6NDA9 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.67■■□□□ 1.06
LRIT2A6NDA9 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT2A6NDA9 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT2A6NDA9 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.66■■□□□ 1.06
LRIT2A6NDA9 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC21.66■■□□□ 1.06
LRIT2A6NDA9 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.66■■□□□ 1.06
LRIT2A6NDA9 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT2A6NDA9 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT2A6NDA9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
LRIT2A6NDA9 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT2A6NDA9 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
LRIT2A6NDA9 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT2A6NDA9 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC21.65■■□□□ 1.06
LRIT2A6NDA9 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC21.65■■□□□ 1.06
LRIT2A6NDA9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
LRIT2A6NDA9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.65■■□□□ 1.06
LRIT2A6NDA9 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
LRIT2A6NDA9 AC005703.6-201ENST00000623265 1329 ntBASIC21.64■■□□□ 1.05
LRIT2A6NDA9 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.64■■□□□ 1.05
LRIT2A6NDA9 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
LRIT2A6NDA9 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
LRIT2A6NDA9 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.63■■□□□ 1.05
LRIT2A6NDA9 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
LRIT2A6NDA9 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms