Protein–RNA interactions for Protein: A0AVI4

TMEM129, E3 ubiquitin-protein ligase TM129, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM129A0AVI4 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TMEM129A0AVI4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM129A0AVI4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TMEM129A0AVI4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
TMEM129A0AVI4 FOXO3B-201ENST00000395675 1928 ntBASIC20.57■□□□□ 0.88
TMEM129A0AVI4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM129A0AVI4 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM129A0AVI4 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM129A0AVI4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TMEM129A0AVI4 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.57■□□□□ 0.88
TMEM129A0AVI4 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
TMEM129A0AVI4 ANOS2P-203ENST00000472227 1816 ntBASIC20.56■□□□□ 0.88
TMEM129A0AVI4 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM129A0AVI4 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM129A0AVI4 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM129A0AVI4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM129A0AVI4 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.56■□□□□ 0.88
TMEM129A0AVI4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM129A0AVI4 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TMEM129A0AVI4 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TMEM129A0AVI4 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
TMEM129A0AVI4 EP400NL-214ENST00000641289 2402 ntBASIC20.55■□□□□ 0.88
TMEM129A0AVI4 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM129A0AVI4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEM129A0AVI4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TMEM129A0AVI4 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.55■□□□□ 0.88
TMEM129A0AVI4 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.55■□□□□ 0.88
TMEM129A0AVI4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM129A0AVI4 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM129A0AVI4 DUSP8P3-201ENST00000399571 1760 ntBASIC20.54■□□□□ 0.88
TMEM129A0AVI4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.54■□□□□ 0.88
TMEM129A0AVI4 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
TMEM129A0AVI4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM129A0AVI4 AC092068.2-201ENST00000590491 1708 ntBASIC20.54■□□□□ 0.88
TMEM129A0AVI4 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.54■□□□□ 0.88
TMEM129A0AVI4 AC103834.1-201ENST00000520383 144 ntBASIC20.54■□□□□ 0.88
TMEM129A0AVI4 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.54■□□□□ 0.88
TMEM129A0AVI4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM129A0AVI4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TMEM129A0AVI4 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM129A0AVI4 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM129A0AVI4 KRT18P10-201ENST00000388836 1287 ntBASIC20.53■□□□□ 0.88
TMEM129A0AVI4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.53■□□□□ 0.88
TMEM129A0AVI4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM129A0AVI4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC20.53■□□□□ 0.88
TMEM129A0AVI4 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM129A0AVI4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM129A0AVI4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM129A0AVI4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
TMEM129A0AVI4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
TMEM129A0AVI4 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 LINC00565-201ENST00000562710 2331 ntBASIC20.52■□□□□ 0.88
TMEM129A0AVI4 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
TMEM129A0AVI4 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM129A0AVI4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM129A0AVI4 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM129A0AVI4 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
TMEM129A0AVI4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
TMEM129A0AVI4 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM129A0AVI4 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM129A0AVI4 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM129A0AVI4 LONRF2P2-201ENST00000439212 571 ntBASIC20.51■□□□□ 0.87
TMEM129A0AVI4 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM129A0AVI4 AC019171.1-201ENST00000601251 1056 ntBASIC20.51■□□□□ 0.87
TMEM129A0AVI4 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.51■□□□□ 0.87
TMEM129A0AVI4 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM129A0AVI4 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM129A0AVI4 KRT8P33-201ENST00000508125 1423 ntBASIC20.51■□□□□ 0.87
TMEM129A0AVI4 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
TMEM129A0AVI4 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM129A0AVI4 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM129A0AVI4 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC20.5■□□□□ 0.87
TMEM129A0AVI4 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM129A0AVI4 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TMEM129A0AVI4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.5■□□□□ 0.87
TMEM129A0AVI4 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
TMEM129A0AVI4 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
TMEM129A0AVI4 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 MIR4508-201ENST00000584178 70 ntBASIC20.49■□□□□ 0.87
TMEM129A0AVI4 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
TMEM129A0AVI4 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms