Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 NIPA2-202ENST00000359727 1531 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
TRBV5-4A0A0C4DH59 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRBV5-4A0A0C4DH59 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
TRBV5-4A0A0C4DH59 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC22.58■■□□□ 1.21
TRBV5-4A0A0C4DH59 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC22.58■■□□□ 1.21
TRBV5-4A0A0C4DH59 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.58■■□□□ 1.2
TRBV5-4A0A0C4DH59 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
TRBV5-4A0A0C4DH59 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
TRBV5-4A0A0C4DH59 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV5-4A0A0C4DH59 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
TRBV5-4A0A0C4DH59 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV5-4A0A0C4DH59 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV5-4A0A0C4DH59 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV5-4A0A0C4DH59 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV5-4A0A0C4DH59 MTDHP2-201ENST00000601468 714 ntBASIC22.56■■□□□ 1.2
TRBV5-4A0A0C4DH59 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TRBV5-4A0A0C4DH59 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.56■■□□□ 1.2
TRBV5-4A0A0C4DH59 TSPY9P-201ENST00000440215 945 ntBASIC22.55■■□□□ 1.2
TRBV5-4A0A0C4DH59 TSPY11P-201ENST00000442607 1045 ntBASIC22.55■■□□□ 1.2
TRBV5-4A0A0C4DH59 AC010997.5-201ENST00000609182 354 ntBASIC22.55■■□□□ 1.2
TRBV5-4A0A0C4DH59 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV5-4A0A0C4DH59 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.55■■□□□ 1.2
TRBV5-4A0A0C4DH59 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV5-4A0A0C4DH59 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
TRBV5-4A0A0C4DH59 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
TRBV5-4A0A0C4DH59 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV5-4A0A0C4DH59 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV5-4A0A0C4DH59 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV5-4A0A0C4DH59 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV5-4A0A0C4DH59 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC22.54■■□□□ 1.2
TRBV5-4A0A0C4DH59 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
TRBV5-4A0A0C4DH59 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.54■■□□□ 1.2
TRBV5-4A0A0C4DH59 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC22.53■■□□□ 1.2
TRBV5-4A0A0C4DH59 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.53■■□□□ 1.2
TRBV5-4A0A0C4DH59 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRBV5-4A0A0C4DH59 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
TRBV5-4A0A0C4DH59 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
TRBV5-4A0A0C4DH59 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
TRBV5-4A0A0C4DH59 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
TRBV5-4A0A0C4DH59 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.52■■□□□ 1.2
TRBV5-4A0A0C4DH59 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV5-4A0A0C4DH59 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV5-4A0A0C4DH59 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC22.52■■□□□ 1.2
TRBV5-4A0A0C4DH59 AC005703.6-201ENST00000623265 1329 ntBASIC22.52■■□□□ 1.2
TRBV5-4A0A0C4DH59 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC22.52■■□□□ 1.2
TRBV5-4A0A0C4DH59 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
TRBV5-4A0A0C4DH59 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV5-4A0A0C4DH59 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV5-4A0A0C4DH59 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
TRBV5-4A0A0C4DH59 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV5-4A0A0C4DH59 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.51■■□□□ 1.19
TRBV5-4A0A0C4DH59 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV5-4A0A0C4DH59 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
TRBV5-4A0A0C4DH59 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.51■■□□□ 1.19
TRBV5-4A0A0C4DH59 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 USF2-207ENST00000595068 1612 ntTSL 5 BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
TRBV5-4A0A0C4DH59 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
TRBV5-4A0A0C4DH59 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRBV5-4A0A0C4DH59 TFPT-201ENST00000391757 774 ntTSL 5 BASIC22.48■■□□□ 1.19
TRBV5-4A0A0C4DH59 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
TRBV5-4A0A0C4DH59 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms