Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC29.43■■■□□ 2.3
LOC102724428A0A0B4J2F2 AL031602.1-201ENST00000633169 911 ntBASIC29.43■■■□□ 2.3
LOC102724428A0A0B4J2F2 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
LOC102724428A0A0B4J2F2 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC29.43■■■□□ 2.3
LOC102724428A0A0B4J2F2 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
LOC102724428A0A0B4J2F2 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC29.43■■■□□ 2.3
LOC102724428A0A0B4J2F2 VGF-203ENST00000611537 1622 ntTSL 5 BASIC29.42■■■□□ 2.3
LOC102724428A0A0B4J2F2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
LOC102724428A0A0B4J2F2 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC29.42■■■□□ 2.3
LOC102724428A0A0B4J2F2 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC29.42■■■□□ 2.3
LOC102724428A0A0B4J2F2 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC29.42■■■□□ 2.3
LOC102724428A0A0B4J2F2 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC29.41■■■□□ 2.3
LOC102724428A0A0B4J2F2 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LOC102724428A0A0B4J2F2 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC29.41■■■□□ 2.3
LOC102724428A0A0B4J2F2 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LOC102724428A0A0B4J2F2 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LOC102724428A0A0B4J2F2 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LOC102724428A0A0B4J2F2 KRT18P5-201ENST00000436075 1291 ntBASIC29.4■■■□□ 2.3
LOC102724428A0A0B4J2F2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC29.4■■■□□ 2.3
LOC102724428A0A0B4J2F2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
LOC102724428A0A0B4J2F2 NKILA-201ENST00000613231 537 ntTSL 4 BASIC29.4■■■□□ 2.3
LOC102724428A0A0B4J2F2 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC29.4■■■□□ 2.3
LOC102724428A0A0B4J2F2 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LOC102724428A0A0B4J2F2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC29.4■■■□□ 2.3
LOC102724428A0A0B4J2F2 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC29.39■■■□□ 2.3
LOC102724428A0A0B4J2F2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC29.39■■■□□ 2.3
LOC102724428A0A0B4J2F2 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
LOC102724428A0A0B4J2F2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC29.39■■■□□ 2.3
LOC102724428A0A0B4J2F2 YBX1P1-201ENST00000445822 960 ntBASIC29.39■■■□□ 2.3
LOC102724428A0A0B4J2F2 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC29.39■■■□□ 2.3
LOC102724428A0A0B4J2F2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC29.39■■■□□ 2.3
LOC102724428A0A0B4J2F2 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.3
LOC102724428A0A0B4J2F2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC29.39■■■□□ 2.3
LOC102724428A0A0B4J2F2 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC29.39■■■□□ 2.29
LOC102724428A0A0B4J2F2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC29.38■■■□□ 2.29
LOC102724428A0A0B4J2F2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC29.38■■■□□ 2.29
LOC102724428A0A0B4J2F2 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC29.38■■■□□ 2.29
LOC102724428A0A0B4J2F2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC29.38■■■□□ 2.29
LOC102724428A0A0B4J2F2 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LOC102724428A0A0B4J2F2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC29.38■■■□□ 2.29
LOC102724428A0A0B4J2F2 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC29.38■■■□□ 2.29
LOC102724428A0A0B4J2F2 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC29.38■■■□□ 2.29
LOC102724428A0A0B4J2F2 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC29.38■■■□□ 2.29
LOC102724428A0A0B4J2F2 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC29.38■■■□□ 2.29
LOC102724428A0A0B4J2F2 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC29.37■■■□□ 2.29
LOC102724428A0A0B4J2F2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC29.37■■■□□ 2.29
LOC102724428A0A0B4J2F2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LOC102724428A0A0B4J2F2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.37■■■□□ 2.29
LOC102724428A0A0B4J2F2 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LOC102724428A0A0B4J2F2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.36■■■□□ 2.29
LOC102724428A0A0B4J2F2 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LOC102724428A0A0B4J2F2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC29.36■■■□□ 2.29
LOC102724428A0A0B4J2F2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC29.36■■■□□ 2.29
LOC102724428A0A0B4J2F2 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC29.36■■■□□ 2.29
LOC102724428A0A0B4J2F2 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LOC102724428A0A0B4J2F2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
LOC102724428A0A0B4J2F2 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.36■■■□□ 2.29
LOC102724428A0A0B4J2F2 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC29.36■■■□□ 2.29
LOC102724428A0A0B4J2F2 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 AC126544.1-201ENST00000580842 1059 ntBASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 AC092437.1-201ENST00000624794 1048 ntBASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC29.35■■■□□ 2.29
LOC102724428A0A0B4J2F2 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 DUX4L2-201ENST00000561772 1275 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 AL137784.2-201ENST00000607332 1000 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 pRNA.6-201ENST00000610482 90 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 pRNA.5-201ENST00000612139 90 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 pRNA.11-201ENST00000618423 90 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 pRNA.13-201ENST00000619112 90 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 DUX4L6-201ENST00000626483 1275 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 DUX4L1-201ENST00000627662 1275 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 DUX4L8-201ENST00000629013 1275 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 DUX4L3-201ENST00000630187 1275 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 DUX4L7-201ENST00000630678 1275 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 DUX4L5-201ENST00000630834 1275 ntBASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 LSR-205ENST00000427250 1606 ntTSL 2 BASIC29.34■■■□□ 2.29
LOC102724428A0A0B4J2F2 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC29.33■■■□□ 2.29
LOC102724428A0A0B4J2F2 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC29.33■■■□□ 2.29
LOC102724428A0A0B4J2F2 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC29.33■■■□□ 2.29
LOC102724428A0A0B4J2F2 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC29.33■■■□□ 2.29
LOC102724428A0A0B4J2F2 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC29.33■■■□□ 2.29
LOC102724428A0A0B4J2F2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC29.33■■■□□ 2.29
LOC102724428A0A0B4J2F2 GTSE1-AS1-202ENST00000623117 1518 ntBASIC29.33■■■□□ 2.29
LOC102724428A0A0B4J2F2 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC29.32■■■□□ 2.28
LOC102724428A0A0B4J2F2 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC29.32■■■□□ 2.28
LOC102724428A0A0B4J2F2 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC29.32■■■□□ 2.28
LOC102724428A0A0B4J2F2 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC29.32■■■□□ 2.28
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms