Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
TRAV12-1A0A0B4J245 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
TRAV12-1A0A0B4J245 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 BID-212ENST00000614949 1988 ntTSL 5 BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16■□□□□ 0.15
TRAV12-1A0A0B4J245 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC15.99■□□□□ 0.15
TRAV12-1A0A0B4J245 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
TRAV12-1A0A0B4J245 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-1A0A0B4J245 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-1A0A0B4J245 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-1A0A0B4J245 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-1A0A0B4J245 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TRAV12-1A0A0B4J245 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 MYB-221ENST00000527615 2381 ntTSL 5 BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 GCA-201ENST00000233612 1694 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TRAV12-1A0A0B4J245 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 MIR3665-201ENST00000578708 105 ntBASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
TRAV12-1A0A0B4J245 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
TRAV12-1A0A0B4J245 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-1A0A0B4J245 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-1A0A0B4J245 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-1A0A0B4J245 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
TRAV12-1A0A0B4J245 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV12-1A0A0B4J245 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-1A0A0B4J245 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC15.95■□□□□ 0.14
TRAV12-1A0A0B4J245 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
TRAV12-1A0A0B4J245 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV12-1A0A0B4J245 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-1A0A0B4J245 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC15.94■□□□□ 0.14
TRAV12-1A0A0B4J245 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV12-1A0A0B4J245 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC15.94■□□□□ 0.14
TRAV12-1A0A0B4J245 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
TRAV12-1A0A0B4J245 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-1A0A0B4J245 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
TRAV12-1A0A0B4J245 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms