Protein–RNA interactions for Protein: A0A0A6YYK4

TRBV7-1, T-cell receptor beta variable 7-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV7-1A0A0A6YYK4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC17.67■□□□□ 0.42
TRBV7-1A0A0A6YYK4 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC17.66■□□□□ 0.42
TRBV7-1A0A0A6YYK4 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 MIR6722-201ENST00000617286 78 ntBASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 REST-206ENST00000612429 1376 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 REST-207ENST00000616975 1370 ntTSL 5 BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TRBV7-1A0A0A6YYK4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
TRBV7-1A0A0A6YYK4 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 AC009299.2-201ENST00000482477 511 ntBASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 MIR4787-201ENST00000607364 84 ntBASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 AC092028.1-203ENST00000608262 953 ntBASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 RARA-203ENST00000394086 2008 ntTSL 2 BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TRBV7-1A0A0A6YYK4 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 AC239859.2-201ENST00000444165 318 ntBASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 AL451085.2-201ENST00000605085 799 ntBASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC17.62■□□□□ 0.41
TRBV7-1A0A0A6YYK4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
TRBV7-1A0A0A6YYK4 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms