Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
TRBV6-7A0A0A0MS04 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
TRBV6-7A0A0A0MS04 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV6-7A0A0A0MS04 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV6-7A0A0A0MS04 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.08■□□□□ 0.64
TRBV6-7A0A0A0MS04 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV6-7A0A0A0MS04 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV6-7A0A0A0MS04 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV6-7A0A0A0MS04 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV6-7A0A0A0MS04 AL161729.1-201ENST00000604104 1402 ntBASIC19.08■□□□□ 0.64
TRBV6-7A0A0A0MS04 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV6-7A0A0A0MS04 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV6-7A0A0A0MS04 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-7A0A0A0MS04 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-7A0A0A0MS04 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-7A0A0A0MS04 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-7A0A0A0MS04 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-7A0A0A0MS04 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-7A0A0A0MS04 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-7A0A0A0MS04 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TRBV6-7A0A0A0MS04 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV6-7A0A0A0MS04 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.07■□□□□ 0.64
TRBV6-7A0A0A0MS04 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRBV6-7A0A0A0MS04 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 MIR6765-201ENST00000614092 87 ntBASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV6-7A0A0A0MS04 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV6-7A0A0A0MS04 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV6-7A0A0A0MS04 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 C1orf229-201ENST00000623686 2258 ntBASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 DUX4L9-201ENST00000449051 1259 ntBASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV6-7A0A0A0MS04 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.02■□□□□ 0.63
TRBV6-7A0A0A0MS04 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC19.02■□□□□ 0.63
TRBV6-7A0A0A0MS04 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV6-7A0A0A0MS04 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV6-7A0A0A0MS04 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV6-7A0A0A0MS04 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-7A0A0A0MS04 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-7A0A0A0MS04 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-7A0A0A0MS04 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV6-7A0A0A0MS04 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms