Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC187A0A096LP49 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.73■■□□□ 1.07
CCDC187A0A096LP49 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC21.73■■□□□ 1.07
CCDC187A0A096LP49 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC187A0A096LP49 AC006455.2-201ENST00000429931 906 ntBASIC21.73■■□□□ 1.07
CCDC187A0A096LP49 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC187A0A096LP49 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC187A0A096LP49 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
CCDC187A0A096LP49 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
CCDC187A0A096LP49 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC187A0A096LP49 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC187A0A096LP49 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC187A0A096LP49 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC187A0A096LP49 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.72■■□□□ 1.07
CCDC187A0A096LP49 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CCDC187A0A096LP49 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.71■■□□□ 1.07
CCDC187A0A096LP49 GRAMD4P2-201ENST00000423297 1097 ntBASIC21.71■■□□□ 1.07
CCDC187A0A096LP49 MIR3181-201ENST00000578512 73 ntBASIC21.71■■□□□ 1.07
CCDC187A0A096LP49 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CCDC187A0A096LP49 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.7■■□□□ 1.06
CCDC187A0A096LP49 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC187A0A096LP49 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC187A0A096LP49 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
CCDC187A0A096LP49 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC187A0A096LP49 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC21.7■■□□□ 1.06
CCDC187A0A096LP49 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CCDC187A0A096LP49 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC21.7■■□□□ 1.06
CCDC187A0A096LP49 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 AK1-201ENST00000223836 736 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CCDC187A0A096LP49 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC187A0A096LP49 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC187A0A096LP49 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC187A0A096LP49 SP2-202ENST00000613139 908 ntTSL 5 BASIC21.68■■□□□ 1.06
CCDC187A0A096LP49 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CCDC187A0A096LP49 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC187A0A096LP49 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
CCDC187A0A096LP49 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 AL161729.1-201ENST00000604104 1402 ntBASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CCDC187A0A096LP49 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC187A0A096LP49 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
CCDC187A0A096LP49 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC187A0A096LP49 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC187A0A096LP49 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC187A0A096LP49 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC187A0A096LP49 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CCDC187A0A096LP49 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC21.66■■□□□ 1.06
CCDC187A0A096LP49 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC187A0A096LP49 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC187A0A096LP49 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC187A0A096LP49 SNX3-202ENST00000349379 890 ntTSL 2 BASIC21.65■■□□□ 1.06
CCDC187A0A096LP49 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC21.65■■□□□ 1.06
CCDC187A0A096LP49 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC187A0A096LP49 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CCDC187A0A096LP49 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
CCDC187A0A096LP49 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.06
CCDC187A0A096LP49 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CCDC187A0A096LP49 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
CCDC187A0A096LP49 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CCDC187A0A096LP49 AC034268.1-201ENST00000441047 882 ntBASIC21.64■■□□□ 1.05
CCDC187A0A096LP49 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC187A0A096LP49 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC187A0A096LP49 AC126544.1-201ENST00000580842 1059 ntBASIC21.64■■□□□ 1.05
CCDC187A0A096LP49 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.64■■□□□ 1.05
CCDC187A0A096LP49 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.64■■□□□ 1.05
CCDC187A0A096LP49 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
CCDC187A0A096LP49 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC187A0A096LP49 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC187A0A096LP49 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
CCDC187A0A096LP49 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
CCDC187A0A096LP49 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC187A0A096LP49 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CCDC187A0A096LP49 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 CD37-213ENST00000598095 1598 ntTSL 2 BASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CCDC187A0A096LP49 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms