Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAV27A0A087WT01 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAV27A0A087WT01 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
TRAV27A0A087WT01 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 AC120024.1-201ENST00000562672 995 ntBASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 PVT1_1.1-201ENST00000615125 194 ntBASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
TRAV27A0A087WT01 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
TRAV27A0A087WT01 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 EI24-204ENST00000527235 1625 ntTSL 5 BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 TSPY13P-201ENST00000338964 914 ntBASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 STK32C-205ENST00000456004 607 ntTSL 2 BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 AC010980.1-201ENST00000587192 1142 ntBASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
TRAV27A0A087WT01 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
TRAV27A0A087WT01 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV27A0A087WT01 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV27A0A087WT01 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV27A0A087WT01 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
TRAV27A0A087WT01 ALDH1A3-203ENST00000557963 1670 ntBASIC20.58■□□□□ 0.88
TRAV27A0A087WT01 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAV27A0A087WT01 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV27A0A087WT01 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TRAV27A0A087WT01 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV27A0A087WT01 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV27A0A087WT01 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC20.57■□□□□ 0.88
TRAV27A0A087WT01 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV27A0A087WT01 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.57■□□□□ 0.88
TRAV27A0A087WT01 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TRAV27A0A087WT01 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 AC092068.2-201ENST00000590491 1708 ntBASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TRAV27A0A087WT01 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TRAV27A0A087WT01 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms