Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 SSR4-202ENST00000370085 526 ntTSL 2 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 FAM21EP-201ENST00000417804 985 ntBASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC068831.5-201ENST00000557387 328 ntBASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC005274.1-201ENST00000623460 802 ntBASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC23.61■■□□□ 1.37
BIVM-ERCC5R4GMW8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC092115.1-201ENST00000566277 1402 ntBASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 ACTBP14-201ENST00000411655 1089 ntBASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 AP005212.2-201ENST00000584979 510 ntBASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 FGD5P1-202ENST00000614866 2498 ntBASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
BIVM-ERCC5R4GMW8 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 FAM86KP-201ENST00000509817 987 ntBASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 TYMSP2-201ENST00000589501 424 ntBASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 FES-204ENST00000414248 2327 ntTSL 2 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 HIST1H2BK-201ENST00000356950 381 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 HMGA1P1-201ENST00000415560 1062 ntBASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 CU639417.1-201ENST00000464664 460 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 ORAOV1-205ENST00000535657 709 ntAPPRIS P2 TSL 3 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 AC104640.1-201ENST00000562617 2109 ntBASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 H2BFS-201ENST00000599962 460 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC23.59■■□□□ 1.37
BIVM-ERCC5R4GMW8 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC23.58■■□□□ 1.37
BIVM-ERCC5R4GMW8 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms