Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 DCAF13-201ENST00000297579 2642 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 CACUL1-201ENST00000369151 11311 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 FAM86JP-201ENST00000467239 1910 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 KRT16P4-201ENST00000453883 522 ntBASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AL671277.2-201ENST00000458060 996 ntBASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 TOB2P1-201ENST00000469761 992 ntBASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AC074051.2-201ENST00000565115 352 ntBASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AC006557.2-201ENST00000592985 1240 ntBASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AL009183.1-201ENST00000603760 355 ntBASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 ATXN2L-201ENST00000325215 3788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AL355102.3-201ENST00000554299 1678 ntBASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 EPB41L5-205ENST00000452780 6410 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 HDLBP-204ENST00000391976 4489 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 AC010970.1-201ENST00000445125 1848 ntBASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
TRAPPC1Q9Y5R8 KCNMA1-265ENST00000639591 3888 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 SLC44A3-AS1-215ENST00000634870 5956 ntTSL 5 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 KCNMA1-232ENST00000638306 3811 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 TVP23A-201ENST00000299866 3360 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 AL021155.1-201ENST00000438808 2637 ntBASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 CNKSR2-207ENST00000543067 4355 ntTSL 2 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 AC092474.2-201ENST00000424288 719 ntBASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC11.15□□□□□ -0.62
TRAPPC1Q9Y5R8 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms