Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 AC021723.1-201ENST00000486306 515 ntBASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 AC026434.2-201ENST00000506094 1078 ntBASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.64□□□□□ -0.23
NPIPA1Q9UND3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 AC007292.2-201ENST00000593524 1812 ntBASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 AL136309.1-201ENST00000403917 691 ntBASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 CHMP1AP1-201ENST00000445563 662 ntBASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 AC044849.1-201ENST00000519737 1188 ntBASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 RHOQP1-201ENST00000555758 579 ntBASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 AC005730.2-201ENST00000564549 1184 ntBASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 DUX4L47-201ENST00000566374 394 ntBASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 NDUFV2P1-201ENST00000596415 907 ntBASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.63□□□□□ -0.23
NPIPA1Q9UND3 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NPIPA1Q9UND3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms