Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 ADM-202ENST00000524948 584 ntTSL 2 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 AC002472.3-201ENST00000640124 621 ntBASIC14.72□□□□□ -0.05
SPASTQ9UBP0 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 KRT8P29-201ENST00000420409 1371 ntBASIC14.72□□□□□ -0.05
SPASTQ9UBP0 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
SPASTQ9UBP0 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 RN7SKP175-201ENST00000408472 289 ntBASIC14.71□□□□□ -0.05
SPASTQ9UBP0 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 HIST2H2BC-201ENST00000498492 580 ntBASIC14.71□□□□□ -0.05
SPASTQ9UBP0 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 AC005740.2-201ENST00000511085 419 ntBASIC14.71□□□□□ -0.05
SPASTQ9UBP0 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 AC005730.2-201ENST00000564549 1184 ntBASIC14.71□□□□□ -0.05
SPASTQ9UBP0 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 AL136301.1-201ENST00000615830 422 ntBASIC14.71□□□□□ -0.05
SPASTQ9UBP0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.71□□□□□ -0.05
SPASTQ9UBP0 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
SPASTQ9UBP0 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SPASTQ9UBP0 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms