Protein–RNA interactions for Protein: Q9C0C9

UBE2O, (E3-independent) E2 ubiquitin-conjugating enzyme, humanhuman

Known RBP Predictions only

Length 1,292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2OQ9C0C9 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 FLJ16779-201ENST00000612722 7638 ntBASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
UBE2OQ9C0C9 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AC020910.5-201ENST00000623668 1865 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AQP7P5-201ENST00000428759 1049 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 TSPY25P-201ENST00000429463 745 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AQP7P4-201ENST00000447083 1042 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AQP7P2-201ENST00000453967 1041 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 PAQR9-AS1-203ENST00000497652 516 ntTSL 3 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AC093909.3-201ENST00000504783 336 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 RPS23-204ENST00000507980 836 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AC109479.3-201ENST00000520163 360 ntTSL 3 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 MT3-203ENST00000565838 421 ntTSL 3 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AC103808.3-201ENST00000579714 598 ntTSL 5 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AP005212.2-201ENST00000584979 510 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 FTLP5-201ENST00000586853 534 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 HMGB1P24-201ENST00000611897 328 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AQP7P3-201ENST00000624547 1041 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AL645728.2-202ENST00000641679 227 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 LINC01165-201ENST00000445190 1623 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AC011840.2-201ENST00000563063 1520 ntBASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
UBE2OQ9C0C9 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 HLA-DMA-203ENST00000395305 777 ntBASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 RPL5P21-201ENST00000404620 815 ntBASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 AL354892.2-201ENST00000413088 403 ntTSL 5 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 AL139339.2-201ENST00000608063 657 ntBASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 AP000322.3-201ENST00000608665 388 ntBASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 AC009560.1-201ENST00000620208 434 ntBASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC16.17■□□□□ 0.18
UBE2OQ9C0C9 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms