Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
PCGF1Q9BSM1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 AC055811.4-201ENST00000624039 1754 ntBASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 AHCYP2-201ENST00000430630 1300 ntBASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 MIR6799-201ENST00000620297 69 ntBASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 PCDHGB8P-201ENST00000502926 1973 ntBASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
PCGF1Q9BSM1 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 FGD5P1-202ENST00000614866 2498 ntBASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
PCGF1Q9BSM1 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 REXO1L4P-201ENST00000605109 1937 ntBASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 AC092658.1-201ENST00000505836 891 ntBASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 RNA5SP412-201ENST00000516234 123 ntBASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 RN7SL48P-201ENST00000579283 293 ntBASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 TECR-220ENST00000600083 1204 ntTSL 2 BASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 AC009542.2-202ENST00000619004 1067 ntBASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 ENPP7P14-201ENST00000621765 1040 ntBASIC12.45□□□□□ -0.42
PCGF1Q9BSM1 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms