Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 DGCR9-201ENST00000609630 2415 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 RPL5P21-201ENST00000404620 815 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 NUS1P3-201ENST00000423502 862 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 C2orf27AP3-201ENST00000434123 579 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 AC016694.1-201ENST00000434179 700 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 CTBP2P5-201ENST00000454986 1264 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 AL354718.3-201ENST00000616414 581 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 MIR6775-201ENST00000617557 69 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 CR382287.1-201ENST00000623954 586 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 CICP8-201ENST00000455800 2813 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 PDIA3P1-201ENST00000471856 1510 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 AC084364.1-201ENST00000551967 1556 ntBASIC13.78□□□□□ -0.2
TM9SF2Q99805 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC13.78□□□□□ -0.2
TM9SF2Q99805 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
TM9SF2Q99805 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF2Q99805 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF2Q99805 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF2Q99805 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF2Q99805 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF2Q99805 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF2Q99805 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.77□□□□□ -0.2
TM9SF2Q99805 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
TM9SF2Q99805 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
TM9SF2Q99805 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.77□□□□□ -0.2
TM9SF2Q99805 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
TM9SF2Q99805 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.77□□□□□ -0.2
TM9SF2Q99805 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 AC007551.1-201ENST00000457394 519 ntBASIC13.77□□□□□ -0.21
TM9SF2Q99805 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
TM9SF2Q99805 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 AC079316.1-201ENST00000548397 411 ntBASIC13.77□□□□□ -0.21
TM9SF2Q99805 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.77□□□□□ -0.21
TM9SF2Q99805 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms