Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CRAMP1Q96RY5 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 GDPGP1-201ENST00000329600 1193 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 AGPAT5P1-201ENST00000455855 1019 ntBASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 AL118522.1-201ENST00000611368 560 ntBASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 ST5-261ENST00000626808 1071 ntTSL 5 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 AC007950.2-201ENST00000615045 2347 ntBASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 AL672207.1-201ENST00000328462 1570 ntBASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CRAMP1Q96RY5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 MDS2-201ENST00000374555 1029 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 BX679664.3-201ENST00000414070 555 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 ACTG1P19-201ENST00000418987 1116 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 AC113935.1-201ENST00000471722 555 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 IGHV1-12-201ENST00000518307 205 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 SNORD3B-1-201ENST00000577988 758 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 HKR1-225ENST00000592168 566 ntTSL 4 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 AC012073.1-201ENST00000606114 1108 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 AC104506.1-201ENST00000609247 429 ntBASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CRAMP1Q96RY5 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms