Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 AC092474.2-201ENST00000424288 719 ntBASIC13.92□□□□□ -0.18
NR1H4Q96RI1 PRSS29P-201ENST00000440800 595 ntBASIC13.92□□□□□ -0.18
NR1H4Q96RI1 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 AC116407.3-201ENST00000623905 1129 ntBASIC13.92□□□□□ -0.18
NR1H4Q96RI1 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 CCNI-201ENST00000237654 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC13.92□□□□□ -0.18
NR1H4Q96RI1 AGAP12P-201ENST00000585227 2359 ntBASIC13.91□□□□□ -0.18
NR1H4Q96RI1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 ADRA2B-201ENST00000620793 3371 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 BTNL8-201ENST00000231229 2229 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 TRPC7-201ENST00000352189 2241 ntTSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 FAM90A11P-201ENST00000518378 2218 ntBASIC13.91□□□□□ -0.18
NR1H4Q96RI1 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 KCTD9-201ENST00000221200 3401 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 VN2R19P-201ENST00000442399 1052 ntBASIC13.91□□□□□ -0.18
NR1H4Q96RI1 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 UNC93B6-202ENST00000528242 690 ntBASIC13.91□□□□□ -0.18
NR1H4Q96RI1 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 FAM212B-AS1-201ENST00000430373 2131 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 INSRR-201ENST00000368195 5101 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 TKT-203ENST00000423525 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
NR1H4Q96RI1 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms