Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC12.21□□□□□ -0.45
CSMD1Q96PZ7 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
CSMD1Q96PZ7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
CSMD1Q96PZ7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.21□□□□□ -0.45
CSMD1Q96PZ7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC12.21□□□□□ -0.45
CSMD1Q96PZ7 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
CSMD1Q96PZ7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 RARS-210ENST00000626454 177 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 AP002353.1-201ENST00000528257 1599 ntBASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 MIR2278-201ENST00000516344 96 ntBASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 UBR5-AS1-202ENST00000520820 800 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 COX5A-205ENST00000568517 582 ntTSL 3 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 PSMA6-215ENST00000622405 978 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
CSMD1Q96PZ7 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 OR6S1-201ENST00000320704 996 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 AC245369.7-201ENST00000631386 350 ntBASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 PIFO-201ENST00000369737 746 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 AKT3-IT1-201ENST00000417120 517 ntTSL 5 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 OR51A9P-201ENST00000422578 911 ntBASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 CSH2-207ENST00000613718 666 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC12.19□□□□□ -0.46
CSMD1Q96PZ7 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms