Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 SHPRH-211ENST00000629427 7338 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 L1CAM-202ENST00000361981 5004 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
AP1S3Q96PC3 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 NFASC-202ENST00000360049 10120 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 NFASC-225ENST00000539706 10135 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 ORAI2-201ENST00000356387 10811 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 AC022497.1-201ENST00000624916 3691 ntBASIC11.22□□□□□ -0.61
AP1S3Q96PC3 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 MIR346-201ENST00000362234 95 ntBASIC11.22□□□□□ -0.61
AP1S3Q96PC3 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 KRT18P2-201ENST00000447938 1258 ntBASIC11.22□□□□□ -0.61
AP1S3Q96PC3 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 RNA5SP419-201ENST00000515908 135 ntBASIC11.22□□□□□ -0.61
AP1S3Q96PC3 AMT-221ENST00000538581 2038 ntTSL 2 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 AP000845.1-201ENST00000581677 2131 ntBASIC11.22□□□□□ -0.61
AP1S3Q96PC3 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 AC104692.2-201ENST00000603054 253 ntBASIC11.22□□□□□ -0.61
AP1S3Q96PC3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 VWDE-206ENST00000614403 4701 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 FLNB-201ENST00000295956 9463 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 UBASH3B-201ENST00000284273 6912 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 DNAJC3-202ENST00000602402 5591 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
AP1S3Q96PC3 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 PER1-211ENST00000581082 4521 ntTSL 5 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AC113367.3-201ENST00000508316 1912 ntBASIC11.21□□□□□ -0.61
AP1S3Q96PC3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC11.21□□□□□ -0.61
AP1S3Q96PC3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms