Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AP001889.1-201ENST00000525414 633 ntBASIC14□□□□□ -0.17
COL21A1Q96P44 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC14□□□□□ -0.17
COL21A1Q96P44 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14□□□□□ -0.17
COL21A1Q96P44 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14□□□□□ -0.17
COL21A1Q96P44 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
COL21A1Q96P44 BTNL10-201ENST00000595971 695 ntBASIC14□□□□□ -0.17
COL21A1Q96P44 AC233724.13-201ENST00000598383 410 ntBASIC14□□□□□ -0.17
COL21A1Q96P44 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14□□□□□ -0.17
COL21A1Q96P44 AL603764.1-201ENST00000636452 321 ntBASIC14□□□□□ -0.17
COL21A1Q96P44 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14□□□□□ -0.17
COL21A1Q96P44 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
COL21A1Q96P44 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14□□□□□ -0.17
COL21A1Q96P44 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14□□□□□ -0.17
COL21A1Q96P44 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14□□□□□ -0.17
COL21A1Q96P44 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14□□□□□ -0.17
COL21A1Q96P44 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14□□□□□ -0.17
COL21A1Q96P44 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14□□□□□ -0.17
COL21A1Q96P44 AC011474.4-201ENST00000623523 2076 ntBASIC14□□□□□ -0.17
COL21A1Q96P44 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14□□□□□ -0.17
COL21A1Q96P44 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14□□□□□ -0.17
COL21A1Q96P44 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
COL21A1Q96P44 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 AL022328.1-201ENST00000610050 478 ntBASIC13.99□□□□□ -0.17
COL21A1Q96P44 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.99□□□□□ -0.17
COL21A1Q96P44 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
COL21A1Q96P44 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.99□□□□□ -0.17
COL21A1Q96P44 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.98□□□□□ -0.17
COL21A1Q96P44 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
COL21A1Q96P44 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
COL21A1Q96P44 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 378.5 ms