Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 FAM90A7P-201ENST00000382628 1395 ntBASIC19.61■□□□□ 0.73
CFAP53Q96M91 FAM90A23P-201ENST00000400136 1395 ntBASIC19.61■□□□□ 0.73
CFAP53Q96M91 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 SORD2P-201ENST00000558556 1069 ntBASIC19.61■□□□□ 0.73
CFAP53Q96M91 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 AC103810.3-201ENST00000583567 96 ntBASIC19.61■□□□□ 0.73
CFAP53Q96M91 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC19.61■□□□□ 0.73
CFAP53Q96M91 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CFAP53Q96M91 AC140479.7-201ENST00000636301 2332 ntBASIC19.6■□□□□ 0.73
CFAP53Q96M91 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 AC215219.1-201ENST00000400706 1817 ntBASIC19.6■□□□□ 0.73
CFAP53Q96M91 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 AC136759.1-202ENST00000530858 2194 ntBASIC19.6■□□□□ 0.73
CFAP53Q96M91 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 AC007686.3-201ENST00000619017 3487 ntBASIC19.6■□□□□ 0.73
CFAP53Q96M91 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 AKR7A2P1-201ENST00000460134 915 ntBASIC19.6■□□□□ 0.73
CFAP53Q96M91 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 SNORD3B-2-202ENST00000571722 791 ntBASIC19.6■□□□□ 0.73
CFAP53Q96M91 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 GSN-203ENST00000373808 2664 ntTSL 2 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
CFAP53Q96M91 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CFAP53Q96M91 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP53Q96M91 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP53Q96M91 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP53Q96M91 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CFAP53Q96M91 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP53Q96M91 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
CFAP53Q96M91 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP53Q96M91 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP53Q96M91 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP53Q96M91 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP53Q96M91 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CFAP53Q96M91 CYP4F23P-201ENST00000593402 1579 ntBASIC19.59■□□□□ 0.73
CFAP53Q96M91 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP53Q96M91 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CFAP53Q96M91 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms