Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC46Q96FV0 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
LRRC46Q96FV0 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
LRRC46Q96FV0 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
LRRC46Q96FV0 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 AL008707.1-201ENST00000422498 534 ntBASIC13.41□□□□□ -0.26
LRRC46Q96FV0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 CNN2P10-201ENST00000443067 918 ntBASIC13.41□□□□□ -0.26
LRRC46Q96FV0 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 AKR7A2P1-201ENST00000460134 915 ntBASIC13.41□□□□□ -0.26
LRRC46Q96FV0 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 SAMD11P1-201ENST00000571429 661 ntBASIC13.41□□□□□ -0.26
LRRC46Q96FV0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 ZACNP1-201ENST00000612259 710 ntBASIC13.41□□□□□ -0.26
LRRC46Q96FV0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 AC007787.1-201ENST00000588095 1583 ntBASIC13.41□□□□□ -0.26
LRRC46Q96FV0 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
LRRC46Q96FV0 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 TMBIM7P-203ENST00000641617 1718 ntBASIC13.4□□□□□ -0.26
LRRC46Q96FV0 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 COX5BP1-201ENST00000507622 393 ntBASIC13.4□□□□□ -0.26
LRRC46Q96FV0 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 C2orf69P2-201ENST00000562032 1123 ntBASIC13.4□□□□□ -0.26
LRRC46Q96FV0 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.4□□□□□ -0.26
LRRC46Q96FV0 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
LRRC46Q96FV0 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRC46Q96FV0 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRC46Q96FV0 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LRRC46Q96FV0 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
LRRC46Q96FV0 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
LRRC46Q96FV0 CICP17-201ENST00000418553 2377 ntBASIC13.39□□□□□ -0.27
LRRC46Q96FV0 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms