Protein–RNA interactions for Protein: Q96EX1

SMIM12, Small integral membrane protein 12, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM12Q96EX1 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 RPL13P2-201ENST00000440687 659 ntBASIC11.29□□□□□ -0.6
SMIM12Q96EX1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 AC079140.1-201ENST00000508039 487 ntBASIC11.29□□□□□ -0.6
SMIM12Q96EX1 GATB-205ENST00000508611 605 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 AC026150.2-201ENST00000564693 1156 ntBASIC11.29□□□□□ -0.6
SMIM12Q96EX1 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 KRT18P8-201ENST00000581937 1246 ntBASIC11.29□□□□□ -0.6
SMIM12Q96EX1 RPS15-202ENST00000585665 467 ntTSL 3 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 AC091812.2-201ENST00000619081 385 ntBASIC11.29□□□□□ -0.6
SMIM12Q96EX1 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.29□□□□□ -0.6
SMIM12Q96EX1 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 FAM90A12P-201ENST00000519497 2375 ntBASIC11.28□□□□□ -0.6
SMIM12Q96EX1 FAM90A24P-201ENST00000520792 2369 ntBASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AC083964.2-201ENST00000623988 2396 ntBASIC11.28□□□□□ -0.6
SMIM12Q96EX1 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 DGCR5-203ENST00000438934 5492 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 STOX2-201ENST00000308497 10458 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AL137783.1-201ENST00000623494 1896 ntBASIC11.28□□□□□ -0.6
SMIM12Q96EX1 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AC012617.1-204ENST00000586340 2305 ntBASIC11.28□□□□□ -0.6
SMIM12Q96EX1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 SUN1-204ENST00000403868 978 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 FAM210CP-201ENST00000445714 574 ntBASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 SLC25A39P2-201ENST00000537614 270 ntBASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AC145285.3-201ENST00000564603 959 ntBASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AL049840.3-201ENST00000602669 611 ntBASIC11.28□□□□□ -0.6
SMIM12Q96EX1 AC018529.1-201ENST00000613063 361 ntBASIC11.28□□□□□ -0.6
SMIM12Q96EX1 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 DPYSL5-207ENST00000614712 5128 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
SMIM12Q96EX1 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms