Protein–RNA interactions for Protein: Q96D46

NMD3, 60S ribosomal export protein NMD3, humanhuman

Known RBP Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3Q96D46 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NMD3Q96D46 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
NMD3Q96D46 JOSD1-201ENST00000216039 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NMD3Q96D46 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.06□□□□□ -0.16
NMD3Q96D46 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC14.06□□□□□ -0.16
NMD3Q96D46 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NMD3Q96D46 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.06□□□□□ -0.16
NMD3Q96D46 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.06□□□□□ -0.16
NMD3Q96D46 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
NMD3Q96D46 CROT-203ENST00000419147 2959 ntTSL 2 BASIC14.06□□□□□ -0.16
NMD3Q96D46 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NMD3Q96D46 AL445209.1-201ENST00000607269 3491 ntBASIC14.06□□□□□ -0.16
NMD3Q96D46 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NMD3Q96D46 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NMD3Q96D46 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NMD3Q96D46 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 IMPDH1P4-201ENST00000445028 1534 ntBASIC14.05□□□□□ -0.16
NMD3Q96D46 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 DNM1P41-201ENST00000623634 3350 ntBASIC14.05□□□□□ -0.16
NMD3Q96D46 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NMD3Q96D46 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NMD3Q96D46 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 RASA4-203ENST00000461209 3244 ntTSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC14.05□□□□□ -0.16
NMD3Q96D46 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.05□□□□□ -0.16
NMD3Q96D46 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NMD3Q96D46 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 MIR1233-2-201ENST00000408138 82 ntBASIC14.05□□□□□ -0.16
NMD3Q96D46 MIR1233-1-201ENST00000408722 82 ntBASIC14.05□□□□□ -0.16
NMD3Q96D46 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.05□□□□□ -0.16
NMD3Q96D46 AL080243.2-201ENST00000418783 582 ntBASIC14.05□□□□□ -0.16
NMD3Q96D46 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.05□□□□□ -0.16
NMD3Q96D46 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.05□□□□□ -0.16
NMD3Q96D46 DAD1-205ENST00000543337 501 ntTSL 3 BASIC14.05□□□□□ -0.16
NMD3Q96D46 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.05□□□□□ -0.16
NMD3Q96D46 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
NMD3Q96D46 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC14.05□□□□□ -0.16
NMD3Q96D46 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NMD3Q96D46 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 KRT8P22-201ENST00000562317 1415 ntBASIC14.05□□□□□ -0.16
NMD3Q96D46 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.05□□□□□ -0.16
NMD3Q96D46 AP002761.4-201ENST00000565433 3361 ntBASIC14.05□□□□□ -0.16
NMD3Q96D46 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NMD3Q96D46 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NMD3Q96D46 STIM1-220ENST00000616714 4356 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.04□□□□□ -0.16
NMD3Q96D46 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.04□□□□□ -0.16
NMD3Q96D46 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.04□□□□□ -0.16
NMD3Q96D46 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
NMD3Q96D46 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NMD3Q96D46 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NMD3Q96D46 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NMD3Q96D46 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NMD3Q96D46 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 96.5 ms