Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 SCARNA20.5-201ENST00000516991 142 ntBASIC15.64■□□□□ 0.09
DDX1Q92499 NEU3-202ENST00000526068 431 ntTSL 2 BASIC15.64■□□□□ 0.09
DDX1Q92499 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
DDX1Q92499 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC15.64■□□□□ 0.09
DDX1Q92499 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC15.64■□□□□ 0.09
DDX1Q92499 MIR4722-201ENST00000578292 60 ntBASIC15.64■□□□□ 0.09
DDX1Q92499 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.64■□□□□ 0.09
DDX1Q92499 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC15.64■□□□□ 0.09
DDX1Q92499 AC008825.2-201ENST00000603374 718 ntBASIC15.64■□□□□ 0.09
DDX1Q92499 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 ZACNP1-201ENST00000612259 710 ntBASIC15.64■□□□□ 0.09
DDX1Q92499 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.64■□□□□ 0.09
DDX1Q92499 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.64■□□□□ 0.09
DDX1Q92499 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.64■□□□□ 0.09
DDX1Q92499 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
DDX1Q92499 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
DDX1Q92499 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
DDX1Q92499 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
DDX1Q92499 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 KRT8P4-201ENST00000509735 1454 ntBASIC15.64■□□□□ 0.09
DDX1Q92499 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.64■□□□□ 0.09
DDX1Q92499 AC138028.6-201ENST00000616106 1482 ntBASIC15.64■□□□□ 0.09
DDX1Q92499 AHCYP2-201ENST00000430630 1300 ntBASIC15.64■□□□□ 0.09
DDX1Q92499 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
DDX1Q92499 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
DDX1Q92499 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
DDX1Q92499 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
DDX1Q92499 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC15.63■□□□□ 0.09
DDX1Q92499 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.63■□□□□ 0.09
DDX1Q92499 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 AC026954.1-201ENST00000429771 1293 ntBASIC15.63■□□□□ 0.09
DDX1Q92499 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC15.63■□□□□ 0.09
DDX1Q92499 CNN2P10-201ENST00000443067 918 ntBASIC15.63■□□□□ 0.09
DDX1Q92499 LDHBP1-201ENST00000455730 1119 ntBASIC15.63■□□□□ 0.09
DDX1Q92499 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC15.63■□□□□ 0.09
DDX1Q92499 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC15.63■□□□□ 0.09
DDX1Q92499 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC15.63■□□□□ 0.09
DDX1Q92499 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.63■□□□□ 0.09
DDX1Q92499 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.63■□□□□ 0.09
DDX1Q92499 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC15.63■□□□□ 0.09
DDX1Q92499 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.63■□□□□ 0.09
DDX1Q92499 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
DDX1Q92499 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
DDX1Q92499 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.63■□□□□ 0.09
DDX1Q92499 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
DDX1Q92499 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
DDX1Q92499 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
DDX1Q92499 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms