Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 MKRN5P-201ENST00000445263 1467 ntBASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 AC136604.1-202ENST00000425471 771 ntBASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 COX10-202ENST00000429152 875 ntTSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 AC010336.2-201ENST00000564226 506 ntBASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
CKAP2Q8WWK9 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 AC026434.2-201ENST00000506094 1078 ntBASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 SDHAP3-202ENST00000515467 728 ntBASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 SORD2P-201ENST00000558556 1069 ntBASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 AC051619.7-201ENST00000568314 623 ntBASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 PRSS30P-206ENST00000641773 873 ntBASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 MARK2P9-201ENST00000430958 1727 ntBASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 AP000437.1-201ENST00000624057 2085 ntBASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CKAP2Q8WWK9 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 CES1P1-201ENST00000421606 1704 ntBASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
CKAP2Q8WWK9 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms