Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 MRPL37P1-201ENST00000592451 1337 ntBASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
SMIM4Q8WVI0 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 ATXN2L-215ENST00000564304 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 RNA5SP416-201ENST00000516838 111 ntBASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 AL662844.1-201ENST00000546340 181 ntBASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 TSFM-210ENST00000550559 897 ntTSL 5 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 AL445228.2-201ENST00000605589 952 ntBASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 AC004461.2-201ENST00000629517 803 ntBASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 AL445209.1-201ENST00000607269 3491 ntBASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
SMIM4Q8WVI0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SMIM4Q8WVI0 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms