Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 MAGEA5-201ENST00000446757 942 ntBASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 TMEM198B-204ENST00000484016 896 ntBASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 FADS2-212ENST00000522639 360 ntTSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 AC090857.1-201ENST00000527400 390 ntBASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 PRKXP1-201ENST00000561423 1122 ntBASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 FADS2-215ENST00000574708 385 ntTSL 3 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 AC128714.1-201ENST00000637035 887 ntBASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
SHKBP1Q8TBC3 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 LINC01230-201ENST00000625222 3017 ntBASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AL157407.1-201ENST00000435784 904 ntBASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AC116345.2-201ENST00000512837 523 ntBASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC15.43■□□□□ 0.06
SHKBP1Q8TBC3 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms