Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 LINC02560-201ENST00000596379 459 ntBASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 WFDC1-204ENST00000613603 549 ntBASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 AJ011932.1-201ENST00000621707 465 ntBASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLHC1Q8NHS4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 AL391825.1-201ENST00000457671 1364 ntBASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
CLHC1Q8NHS4 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 AC090505.1-201ENST00000430515 1834 ntBASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 MYADML-201ENST00000474610 2147 ntBASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 AC015688.4-201ENST00000580780 1647 ntBASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 RN7SL832P-201ENST00000607781 1756 ntBASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 AC011498.7-201ENST00000624986 2027 ntBASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
CLHC1Q8NHS4 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 AC020910.5-201ENST00000623668 1865 ntBASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 GRB2-203ENST00000392562 3729 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.19□□□□□ -0.14
CLHC1Q8NHS4 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms