Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL22A1Q8NFW1 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL22A1Q8NFW1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.83■□□□□ 0.6
COL22A1Q8NFW1 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL22A1Q8NFW1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC18.83■□□□□ 0.6
COL22A1Q8NFW1 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
COL22A1Q8NFW1 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL22A1Q8NFW1 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
COL22A1Q8NFW1 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL22A1Q8NFW1 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
COL22A1Q8NFW1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 S100A2-202ENST00000368708 998 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 FTH1P18-201ENST00000412071 549 ntBASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 LINC01693-202ENST00000430123 357 ntTSL 3 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 KRT19P4-201ENST00000443208 943 ntBASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 RN7SL672P-201ENST00000474091 317 ntBASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 CD81-209ENST00000492627 886 ntTSL 3 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 OASL-202ENST00000339275 1492 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 Z98885.3-201ENST00000624882 1757 ntBASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 YY1P2-201ENST00000438766 948 ntBASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 AC079250.1-201ENST00000456046 531 ntBASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 NDUFA3-214ENST00000485876 963 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 MIR8071-1-201ENST00000616769 65 ntBASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 MIR8071-2-201ENST00000616772 65 ntBASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC18.82■□□□□ 0.6
COL22A1Q8NFW1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 VPS28-201ENST00000292510 979 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 VPS28-202ENST00000377348 1097 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 AC233724.9-201ENST00000511694 407 ntBASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 VPS28-210ENST00000529182 1010 ntTSL 2 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 BLOC1S1-203ENST00000548925 571 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 RPS5-205ENST00000598495 800 ntTSL 3 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC18.81■□□□□ 0.6
COL22A1Q8NFW1 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 GRIA3-208ENST00000620581 2991 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
COL22A1Q8NFW1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.3 ms