Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 AC025048.3-201ENST00000590609 569 ntBASIC12.8□□□□□ -0.36
BEST4Q8NFU0 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 AC005702.4-201ENST00000618393 416 ntBASIC12.8□□□□□ -0.36
BEST4Q8NFU0 AF228730.6-201ENST00000641497 218 ntBASIC12.8□□□□□ -0.36
BEST4Q8NFU0 AC084121.3-201ENST00000641716 218 ntBASIC12.8□□□□□ -0.36
BEST4Q8NFU0 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 PCDHGA3-201ENST00000253812 4771 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
BEST4Q8NFU0 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AMIGO3-201ENST00000320431 2862 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AC073869.1-201ENST00000415574 2762 ntBASIC12.79□□□□□ -0.36
BEST4Q8NFU0 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 RBPMS2P1-201ENST00000437762 623 ntBASIC12.79□□□□□ -0.36
BEST4Q8NFU0 RPL13P2-201ENST00000440687 659 ntBASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 AC105339.1-204ENST00000636249 355 ntBASIC12.79□□□□□ -0.36
BEST4Q8NFU0 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.79□□□□□ -0.36
BEST4Q8NFU0 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms