Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
ZNF248Q8NDW4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 AC239868.1-201ENST00000369385 493 ntBASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 RN7SKP175-201ENST00000408472 289 ntBASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 RN7SL258P-201ENST00000478664 300 ntBASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 CTBP2P4-201ENST00000513884 920 ntBASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 AC084364.1-201ENST00000551967 1556 ntBASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 DUX4L47-201ENST00000566374 394 ntBASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 AC008805.1-201ENST00000590892 364 ntBASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 AL109954.1-202ENST00000564051 2148 ntBASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
ZNF248Q8NDW4 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AC103702.1-201ENST00000548801 2630 ntBASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AP000356.3-201ENST00000382243 753 ntBASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 RPL5P21-201ENST00000404620 815 ntBASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AL627389.1-201ENST00000413508 1182 ntBASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AL592076.1-201ENST00000424448 303 ntBASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 HLA-J-204ENST00000495278 958 ntBASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 MIR4783-201ENST00000580343 82 ntBASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 AC004466.1-201ENST00000599515 1080 ntBASIC14.1□□□□□ -0.15
ZNF248Q8NDW4 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms