Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 AL627389.1-201ENST00000413508 1182 ntBASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 RPL18AP3-201ENST00000462885 528 ntBASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 CTBP2P4-201ENST00000513884 920 ntBASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 AC114947.1-202ENST00000514136 344 ntBASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 GMFG-209ENST00000600322 622 ntTSL 5 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 AL022334.2-201ENST00000610000 484 ntBASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 AC009560.1-201ENST00000620208 434 ntBASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 AC009084.3-201ENST00000623356 437 ntBASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPAS3Q8IXF0 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 RPL13AP19-201ENST00000434320 584 ntBASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 DUX4L50-201ENST00000455245 715 ntBASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 FTH1P22-201ENST00000456305 520 ntBASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 AC087392.5-201ENST00000612517 489 ntBASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 CYP51A1P3-201ENST00000400072 1428 ntBASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPAS3Q8IXF0 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS3Q8IXF0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS3Q8IXF0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS3Q8IXF0 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS3Q8IXF0 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS3Q8IXF0 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS3Q8IXF0 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
NPAS3Q8IXF0 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms