Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 CDK7-214ENST00000626796 358 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CCDC60Q8IWA6 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 FES-203ENST00000394302 2133 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AC006335.1-201ENST00000445200 547 ntBASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AC116345.2-201ENST00000512837 523 ntBASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AC084346.2-201ENST00000607097 949 ntBASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AC079336.7-201ENST00000623428 1078 ntBASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 KRT8P19-201ENST00000551916 1455 ntBASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 LINC01165-201ENST00000445190 1623 ntBASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AC215219.1-201ENST00000400706 1817 ntBASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.26■□□□□ 0.19
CCDC60Q8IWA6 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 AHCYP4-201ENST00000419201 1315 ntBASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 AC007274.2-201ENST00000421675 662 ntBASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 SUPT4H1P2-201ENST00000501248 353 ntBASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 AC022447.6-201ENST00000515522 438 ntBASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 AL353770.1-201ENST00000614915 403 ntBASIC16.25■□□□□ 0.19
CCDC60Q8IWA6 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms