Protein–RNA interactions for Protein: Q2NL82

TSR1, Pre-rRNA-processing protein TSR1 homolog, humanhuman

Known RBP Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1Q2NL82 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 Z97985.1-201ENST00000332270 946 ntBASIC16.29■□□□□ 0.2
TSR1Q2NL82 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 KLF2P3-201ENST00000451977 1087 ntBASIC16.29■□□□□ 0.2
TSR1Q2NL82 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 AC093512.1-201ENST00000617969 520 ntBASIC16.29■□□□□ 0.2
TSR1Q2NL82 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 AL158212.4-201ENST00000624062 1286 ntBASIC16.29■□□□□ 0.2
TSR1Q2NL82 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TSR1Q2NL82 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TSR1Q2NL82 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 PER3-208ENST00000613533 6318 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.28■□□□□ 0.2
TSR1Q2NL82 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 AC107890.1-201ENST00000422478 521 ntBASIC16.28■□□□□ 0.2
TSR1Q2NL82 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 AC114501.2-201ENST00000439631 535 ntBASIC16.28■□□□□ 0.2
TSR1Q2NL82 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 GLI4-203ENST00000517468 963 ntTSL 5 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 AC140878.1-201ENST00000565277 250 ntBASIC16.28■□□□□ 0.2
TSR1Q2NL82 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.28■□□□□ 0.2
TSR1Q2NL82 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TSR1Q2NL82 DRD5P1-201ENST00000456605 1438 ntBASIC16.28■□□□□ 0.2
TSR1Q2NL82 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 AL603841.1-201ENST00000430516 664 ntBASIC16.27■□□□□ 0.2
TSR1Q2NL82 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TSR1Q2NL82 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.27■□□□□ 0.2
TSR1Q2NL82 AC036164.1-201ENST00000570544 333 ntBASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms