Protein–RNA interactions for Protein: P62829

RPL23, 60S ribosomal protein L23, humanhuman

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL23P62829 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC11.32□□□□□ -0.6
RPL23P62829 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC11.32□□□□□ -0.6
RPL23P62829 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
RPL23P62829 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC11.32□□□□□ -0.6
RPL23P62829 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL23P62829 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL23P62829 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL23P62829 AC092364.2-202ENST00000597012 1073 ntBASIC11.32□□□□□ -0.6
RPL23P62829 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 IFNL4P1-201ENST00000607083 540 ntBASIC11.32□□□□□ -0.6
RPL23P62829 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL23P62829 TRIM80P-201ENST00000455685 2848 ntBASIC11.32□□□□□ -0.6
RPL23P62829 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL23P62829 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
RPL23P62829 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
RPL23P62829 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
RPL23P62829 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL23P62829 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL23P62829 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.32□□□□□ -0.6
RPL23P62829 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.32□□□□□ -0.6
RPL23P62829 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
RPL23P62829 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC11.31□□□□□ -0.6
RPL23P62829 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 AC110048.1-201ENST00000604293 2157 ntBASIC11.31□□□□□ -0.6
RPL23P62829 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
RPL23P62829 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 AC022400.8-201ENST00000623453 3599 ntBASIC11.31□□□□□ -0.6
RPL23P62829 AC115284.2-201ENST00000624646 2054 ntBASIC11.31□□□□□ -0.6
RPL23P62829 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
RPL23P62829 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 DDC-214ENST00000622873 1839 ntTSL 3 BASIC11.31□□□□□ -0.6
RPL23P62829 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC11.31□□□□□ -0.6
RPL23P62829 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 DFFB-203ENST00000341385 572 ntTSL 5 BASIC11.31□□□□□ -0.6
RPL23P62829 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
RPL23P62829 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 AC074338.1-201ENST00000416825 156 ntBASIC11.31□□□□□ -0.6
RPL23P62829 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.31□□□□□ -0.6
RPL23P62829 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 RARRES2P8-201ENST00000566335 367 ntBASIC11.31□□□□□ -0.6
RPL23P62829 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC11.31□□□□□ -0.6
RPL23P62829 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.31□□□□□ -0.6
RPL23P62829 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
RPL23P62829 HFE2-206ENST00000634927 506 ntTSL 4 BASIC11.31□□□□□ -0.6
RPL23P62829 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 AL445250.1-201ENST00000641671 2259 ntBASIC11.31□□□□□ -0.6
RPL23P62829 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC11.31□□□□□ -0.6
RPL23P62829 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
RPL23P62829 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
RPL23P62829 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC11.31□□□□□ -0.6
RPL23P62829 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.31□□□□□ -0.6
RPL23P62829 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms