Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11AP58511 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.63□□□□□ -0.23
SMIM11AP58511 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
SMIM11AP58511 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
SMIM11AP58511 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM11AP58511 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM11AP58511 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 AC089987.1-201ENST00000551654 2209 ntBASIC13.62□□□□□ -0.23
SMIM11AP58511 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM11AP58511 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMIM11AP58511 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMIM11AP58511 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMIM11AP58511 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 SOCS2P1-201ENST00000417727 557 ntBASIC13.62□□□□□ -0.23
SMIM11AP58511 AL442647.2-201ENST00000429864 857 ntBASIC13.62□□□□□ -0.23
SMIM11AP58511 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM11AP58511 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.62□□□□□ -0.23
SMIM11AP58511 AL512638.1-201ENST00000457493 794 ntBASIC13.62□□□□□ -0.23
SMIM11AP58511 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.62□□□□□ -0.23
SMIM11AP58511 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC13.62□□□□□ -0.23
SMIM11AP58511 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.62□□□□□ -0.23
SMIM11AP58511 AC023310.3-201ENST00000557027 670 ntBASIC13.62□□□□□ -0.23
SMIM11AP58511 AC100756.1-201ENST00000562736 682 ntBASIC13.62□□□□□ -0.23
SMIM11AP58511 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM11AP58511 AC138749.3-201ENST00000567691 622 ntBASIC13.62□□□□□ -0.23
SMIM11AP58511 AC116165.1-201ENST00000611806 668 ntBASIC13.62□□□□□ -0.23
SMIM11AP58511 AP005019.2-201ENST00000615104 511 ntBASIC13.62□□□□□ -0.23
SMIM11AP58511 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
SMIM11AP58511 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.62□□□□□ -0.23
SMIM11AP58511 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC13.62□□□□□ -0.23
SMIM11AP58511 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
SMIM11AP58511 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC13.62□□□□□ -0.23
SMIM11AP58511 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
SMIM11AP58511 AL138725.1-201ENST00000407347 1314 ntBASIC13.62□□□□□ -0.23
SMIM11AP58511 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM11AP58511 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.61□□□□□ -0.23
SMIM11AP58511 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM11AP58511 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM11AP58511 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.61□□□□□ -0.23
SMIM11AP58511 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
SMIM11AP58511 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
SMIM11AP58511 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
SMIM11AP58511 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms