Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
LIMK2P53671 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 AC010327.5-201ENST00000586923 3061 ntBASIC14.88□□□□□ -0.03
LIMK2P53671 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LIMK2P53671 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
LIMK2P53671 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC14.88□□□□□ -0.03
LIMK2P53671 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LIMK2P53671 ACTBP8-201ENST00000403258 1108 ntBASIC14.88□□□□□ -0.03
LIMK2P53671 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.88□□□□□ -0.03
LIMK2P53671 CNN2P8-201ENST00000421872 913 ntBASIC14.88□□□□□ -0.03
LIMK2P53671 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LIMK2P53671 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK2P53671 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK2P53671 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC14.88□□□□□ -0.03
LIMK2P53671 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC14.88□□□□□ -0.03
LIMK2P53671 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LIMK2P53671 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC14.88□□□□□ -0.03
LIMK2P53671 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC14.88□□□□□ -0.03
LIMK2P53671 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.88□□□□□ -0.03
LIMK2P53671 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC14.88□□□□□ -0.03
LIMK2P53671 AC025279.2-201ENST00000569730 653 ntBASIC14.88□□□□□ -0.03
LIMK2P53671 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.88□□□□□ -0.03
LIMK2P53671 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 MIR6869-201ENST00000619434 62 ntBASIC14.88□□□□□ -0.03
LIMK2P53671 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.88□□□□□ -0.03
LIMK2P53671 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 AC067750.1-201ENST00000608826 6545 ntBASIC14.88□□□□□ -0.03
LIMK2P53671 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.88□□□□□ -0.03
LIMK2P53671 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.88□□□□□ -0.03
LIMK2P53671 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LIMK2P53671 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
LIMK2P53671 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 LRRC59-203ENST00000576448 1531 ntBASIC14.87□□□□□ -0.03
LIMK2P53671 AL136172.1-201ENST00000598590 1394 ntBASIC14.87□□□□□ -0.03
LIMK2P53671 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.87□□□□□ -0.03
LIMK2P53671 AC026954.1-201ENST00000429771 1293 ntBASIC14.87□□□□□ -0.03
LIMK2P53671 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LIMK2P53671 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC14.87□□□□□ -0.03
LIMK2P53671 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC14.87□□□□□ -0.03
LIMK2P53671 AC131206.1-201ENST00000538078 1211 ntBASIC14.87□□□□□ -0.03
LIMK2P53671 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC14.87□□□□□ -0.03
LIMK2P53671 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC14.87□□□□□ -0.03
LIMK2P53671 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC14.87□□□□□ -0.03
LIMK2P53671 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 AC010328.2-201ENST00000597698 1111 ntBASIC14.87□□□□□ -0.03
LIMK2P53671 AC008687.7-202ENST00000637404 953 ntBASIC14.87□□□□□ -0.03
LIMK2P53671 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LIMK2P53671 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LIMK2P53671 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK2P53671 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK2P53671 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms