Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 PRORSD1P-202ENST00000563365 2154 ntBASIC14.44□□□□□ -0.1
CXCL12P48061 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 AL672207.1-201ENST00000328462 1570 ntBASIC14.44□□□□□ -0.1
CXCL12P48061 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
CXCL12P48061 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.44□□□□□ -0.1
CXCL12P48061 LINC01500-204ENST00000556815 752 ntTSL 3 BASIC14.44□□□□□ -0.1
CXCL12P48061 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCL12P48061 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 AC010976.2-201ENST00000609697 852 ntBASIC14.44□□□□□ -0.1
CXCL12P48061 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCL12P48061 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 HYMAI-201ENST00000635591 3347 ntBASIC14.44□□□□□ -0.1
CXCL12P48061 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 AL591122.2-201ENST00000624125 1853 ntBASIC14.44□□□□□ -0.1
CXCL12P48061 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL12P48061 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
CXCL12P48061 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CXCL12P48061 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
CXCL12P48061 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 AL391005.1-201ENST00000623953 2435 ntBASIC14.43□□□□□ -0.1
CXCL12P48061 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.43□□□□□ -0.1
CXCL12P48061 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC14.43□□□□□ -0.1
CXCL12P48061 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCL12P48061 KHSRPP1-201ENST00000427983 1768 ntBASIC14.43□□□□□ -0.1
CXCL12P48061 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCL12P48061 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCL12P48061 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC14.43□□□□□ -0.1
CXCL12P48061 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.43□□□□□ -0.1
CXCL12P48061 RN7SL582P-201ENST00000491078 279 ntBASIC14.43□□□□□ -0.1
CXCL12P48061 AC008026.2-201ENST00000495438 348 ntBASIC14.43□□□□□ -0.1
CXCL12P48061 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC14.43□□□□□ -0.1
CXCL12P48061 ANAPC15-217ENST00000545944 704 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
CXCL12P48061 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 THY1-209ENST00000580275 578 ntTSL 3 BASIC14.43□□□□□ -0.1
CXCL12P48061 EIF5AP2-201ENST00000585668 1047 ntBASIC14.43□□□□□ -0.1
CXCL12P48061 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC14.43□□□□□ -0.1
CXCL12P48061 AC010632.2-201ENST00000588369 1224 ntBASIC14.43□□□□□ -0.1
CXCL12P48061 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC14.43□□□□□ -0.1
CXCL12P48061 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.43□□□□□ -0.1
CXCL12P48061 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CXCL12P48061 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCL12P48061 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CXCL12P48061 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.43□□□□□ -0.1
CXCL12P48061 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CXCL12P48061 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.43□□□□□ -0.1
CXCL12P48061 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
CXCL12P48061 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.42□□□□□ -0.1
CXCL12P48061 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
CXCL12P48061 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCL12P48061 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCL12P48061 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.42□□□□□ -0.1
CXCL12P48061 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CXCL12P48061 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CXCL12P48061 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms