Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC15.58■□□□□ 0.08
BRCC3P46736 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.58■□□□□ 0.08
BRCC3P46736 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.58■□□□□ 0.08
BRCC3P46736 AC234782.1-201ENST00000451950 919 ntBASIC15.58■□□□□ 0.08
BRCC3P46736 CEP164P1-201ENST00000455142 418 ntBASIC15.58■□□□□ 0.08
BRCC3P46736 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.58■□□□□ 0.08
BRCC3P46736 IGLV3-15-201ENST00000518356 244 ntBASIC15.58■□□□□ 0.08
BRCC3P46736 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.58■□□□□ 0.08
BRCC3P46736 PGAM1P5-201ENST00000548011 764 ntBASIC15.58■□□□□ 0.08
BRCC3P46736 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC15.58■□□□□ 0.08
BRCC3P46736 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.58■□□□□ 0.08
BRCC3P46736 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC15.58■□□□□ 0.08
BRCC3P46736 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.58■□□□□ 0.08
BRCC3P46736 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
BRCC3P46736 AC007718.1-201ENST00000621078 280 ntBASIC15.58■□□□□ 0.08
BRCC3P46736 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
BRCC3P46736 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC15.58■□□□□ 0.08
BRCC3P46736 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
BRCC3P46736 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.58■□□□□ 0.08
BRCC3P46736 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
BRCC3P46736 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.58■□□□□ 0.08
BRCC3P46736 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
BRCC3P46736 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
BRCC3P46736 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.58■□□□□ 0.08
BRCC3P46736 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.58■□□□□ 0.08
BRCC3P46736 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
BRCC3P46736 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 FGD5P1-202ENST00000614866 2498 ntBASIC15.57■□□□□ 0.08
BRCC3P46736 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.57■□□□□ 0.08
BRCC3P46736 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
BRCC3P46736 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC15.57■□□□□ 0.08
BRCC3P46736 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
BRCC3P46736 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.57■□□□□ 0.08
BRCC3P46736 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
BRCC3P46736 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
BRCC3P46736 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC15.57■□□□□ 0.08
BRCC3P46736 OR2K2-202ENST00000374428 1038 ntBASIC15.57■□□□□ 0.08
BRCC3P46736 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.57■□□□□ 0.08
BRCC3P46736 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.57■□□□□ 0.08
BRCC3P46736 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.57■□□□□ 0.08
BRCC3P46736 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.57■□□□□ 0.08
BRCC3P46736 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC15.57■□□□□ 0.08
BRCC3P46736 POU5F1P2-201ENST00000521750 823 ntBASIC15.57■□□□□ 0.08
BRCC3P46736 PRKXP1-201ENST00000561423 1122 ntBASIC15.57■□□□□ 0.08
BRCC3P46736 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC15.57■□□□□ 0.08
BRCC3P46736 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.57■□□□□ 0.08
BRCC3P46736 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.57■□□□□ 0.08
BRCC3P46736 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 FRMPD2B-201ENST00000431305 1347 ntBASIC15.57■□□□□ 0.08
BRCC3P46736 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.57■□□□□ 0.08
BRCC3P46736 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
BRCC3P46736 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
BRCC3P46736 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC15.57■□□□□ 0.08
BRCC3P46736 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.57■□□□□ 0.08
BRCC3P46736 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
BRCC3P46736 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
BRCC3P46736 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.57■□□□□ 0.08
BRCC3P46736 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
BRCC3P46736 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
BRCC3P46736 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRCC3P46736 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.56■□□□□ 0.08
BRCC3P46736 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRCC3P46736 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC15.56■□□□□ 0.08
BRCC3P46736 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
BRCC3P46736 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
BRCC3P46736 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
BRCC3P46736 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms